{"id":"W4229373213","doi":"10.3390/jof8050490","title":"Providing Scale to a Known Taxonomic Unknown—At Least a 70-Fold Increase in Species Diversity in a Cosmopolitan Nominal Taxon of Lichen-Forming Fungi","year":2022,"lang":"en","type":"article","venue":"Journal of Fungi","topic":"Lichen and fungal ecology","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Museum of Nature","funders":"National Natural Science Foundation of China","keywords":"Biology; Taxon; Clade; Lichen; Evolutionary biology; Species complex; Phylogeography; Phylogenetics; Biodiversity; Ecology; Zoology; Phylogenetic tree; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004335389,0.0001357849,0.0002475048,0.0009983392,0.0005325662,0.00080228,0.0002456719,0.0002334007,0.003552907],"category_scores_gemma":[0.001189432,0.0001190184,0.0001835284,0.0009489417,0.0003968081,0.0006991077,0.0008276773,0.0003365249,0.0005677593],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001851742,"about_ca_system_score_gemma":0.0001402439,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006705773,"about_ca_topic_score_gemma":0.002476419,"domain_scores_codex":[0.9996709,0.00006519986,0.00002273455,0.0001453701,0.00005402692,0.00004180399],"domain_scores_gemma":[0.9989453,0.0003587242,0.0002986275,0.0001996657,0.00009288629,0.0001047469],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003136736,0.00007781951,0.5975097,0.0003908123,0.0002653797,0.000456024,0.001241454,0.0006811118,0.3262966,0.001213647,0.0005404285,0.07101337],"study_design_scores_gemma":[0.000008146863,0.00005416276,0.9877833,0.00002890678,0.00004099727,0.0006537137,0.0004625908,0.0007707244,0.00454907,0.0006415856,0.004998773,0.000008100573],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9920112,0.0005716924,0.003296477,0.00006065413,0.000007511627,0.000008940514,0.0007660578,0.00004524163,0.003232239],"genre_scores_gemma":[0.9967051,0.0001206138,0.002041537,0.00003392088,0.000006589743,0.000008185776,0.0008671948,0.000008112273,0.0002087073],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003552907,"threshold_uncertainty_score":0.0118857,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0295369871415324,"score_gpt":0.2154466918469572,"score_spread":0.1859097047054248,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}