{"id":"W4229444144","doi":"10.1111/jbg.12682","title":"Genomic integration to identify molecular biomarkers associated with indicator traits of gastrointestinal nematode resistance in sheep","year":2022,"lang":"en","type":"article","venue":"Journal of Animal Breeding and Genetics","topic":"Helminth infection and control","field":"Veterinary","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Biology; Candidate gene; Genetics; Genome-wide association study; Quantitative trait locus; Haemonchus contortus; Single-nucleotide polymorphism; Gene; Population; Haplotype; Immunology; Allele; Genotype; Helminths","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004576842,0.0002892116,0.0003759719,0.001044015,0.0002215944,0.0004935553,0.0001990428,0.0003485217,0.001340578],"category_scores_gemma":[0.001117503,0.0001682169,0.0005339617,0.0009491737,0.0001552763,0.0001475008,0.0003320416,0.0002317279,0.0001398514],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001403837,"about_ca_system_score_gemma":0.0002087746,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002983483,"about_ca_topic_score_gemma":0.005933541,"domain_scores_codex":[0.9996067,0.0001220722,0.00002618515,0.0001512596,0.00005166992,0.00004214185],"domain_scores_gemma":[0.9993997,0.0002468419,0.0001890164,0.00006220533,0.00006082134,0.00004136393],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009387553,0.00008285989,0.8127445,0.0002671405,0.0009519046,0.0008545431,0.0003938442,0.001770818,0.150125,0.0004545446,0.0002298152,0.0311863],"study_design_scores_gemma":[0.00001772919,0.0001294609,0.9919776,0.00004079322,0.0004077579,0.0005103857,0.0001537668,0.003200332,0.002061758,0.0003483279,0.001144276,0.000007796659],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9937949,0.0006176502,0.004197495,0.00006070359,0.000006657108,0.00001417575,0.0006477288,0.0000282784,0.0006324524],"genre_scores_gemma":[0.9953679,0.0001924185,0.003387258,0.00003570263,0.000007884462,0.00001449478,0.0006657174,0.000008006913,0.0003207863],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002983483,"threshold_uncertainty_score":0.005932212,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02863032389593406,"score_gpt":0.2996822089231693,"score_spread":0.2710518850272353,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}