{"id":"W4229639462","doi":"10.3410/f.736385543.793563821","title":"Faculty Opinions recommendation of Large-Scale Analyses of Human Microbiomes Reveal Thousands of Small, Novel Genes.","year":2019,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network","funders":"National Human Genome Research Institute; National Cancer Institute; National Institutes of Health; National Energy Research Scientific Computing Center; Stanford Cancer Institute; Joint Genome Institute; Damon Runyon Cancer Research Foundation; Office of Science; Pharmaceutical Research and Manufacturers of America Foundation; U.S. Department of Energy","keywords":"Housekeeping; Housekeeping gene; Biology; Computational biology; Protein family; Gene; Human Protein Atlas; Human Microbiome Project; Genomics; Protein Interaction Networks; Microbiome; Genome; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001444631,0.001775603,0.001193562,0.003573567,0.000889434,0.002266126,0.002487039,0.001896266,0.05980121],"category_scores_gemma":[0.007879215,0.0005330083,0.001144551,0.00572938,0.0004014206,0.001347954,0.002069918,0.001631947,0.07221315],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001080917,"about_ca_system_score_gemma":0.002502007,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01325357,"about_ca_topic_score_gemma":0.03851672,"domain_scores_codex":[0.9988303,0.0001751882,0.0001279506,0.0003778212,0.0003278003,0.0001609056],"domain_scores_gemma":[0.9964975,0.0009107398,0.0004909747,0.000753816,0.0008162059,0.0005308219],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00012668,0.00002828568,0.005321447,0.001511682,0.0001220964,0.00006916223,0.0000405084,0.0003158682,0.0004849846,0.0004993371,0.984937,0.006543067],"study_design_scores_gemma":[0.0002087416,0.00001893932,0.01377331,0.0003851256,0.00007760429,0.0001009274,0.00008850491,0.0006149426,0.0007662702,0.00114515,0.9827895,0.00003101288],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.0002793417,0.0001043754,0.0001099461,0.0001079595,0.00002075063,0.000009232401,0.9981291,0.0003966641,0.0008427027],"genre_scores_gemma":[0.0007186855,0.000076499,0.0003900878,0.00005845257,0.000007206137,0.00002716475,0.9981912,0.0000564746,0.000474273],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.05980121,"threshold_uncertainty_score":0.200055,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05335625776157108,"score_gpt":0.3785608797006717,"score_spread":0.3252046219391006,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}