{"id":"W4232849376","doi":"10.1385/1-59259-038-1:729","title":"DNase I Footprinting","year":2003,"lang":"en","type":"book-chapter","venue":"Humana Press eBooks","topic":"Biomedical Text Mining and Ontologies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hôtel-Dieu de Québec","funders":"","keywords":"Footprinting; DNA footprinting; Deoxyribonuclease I; Hypersensitive site; DNA; Molecular biology; Biology; DNase I hypersensitive site; HMG-box; DNA binding site; Transcription factor; DNA-binding protein; Promoter; Biochemistry; Gene; Gene expression; Base sequence","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001324333,0.002048731,0.002689725,0.002789446,0.001066528,0.001262608,0.001937063,0.001332957,0.03157678],"category_scores_gemma":[0.001190675,0.001097767,0.001034791,0.002390567,0.0009480137,0.0008726373,0.00137141,0.003337672,0.03226901],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005976534,"about_ca_system_score_gemma":0.0006253002,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004325694,"about_ca_topic_score_gemma":0.001021227,"domain_scores_codex":[0.9978409,0.0004662112,0.0001352951,0.0007884248,0.0006334286,0.0001358063],"domain_scores_gemma":[0.9991925,0.0003656054,0.00006673179,0.0001629976,0.0001639162,0.00004823878],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003067268,0.0001554978,0.0002798497,0.003715122,0.00007741313,0.0002878573,0.0002295356,0.0005415139,0.7944274,0.004506754,0.03055248,0.1649199],"study_design_scores_gemma":[0.0000472791,0.0002620326,0.001073523,0.0002067232,0.00006684969,0.0008515333,0.00006641967,0.0005314154,0.3287229,0.002528283,0.6655703,0.00007288119],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.01648358,0.1085686,0.7683935,0.001536488,0.004058038,0.002700655,0.01434629,0.009961218,0.07395165],"genre_scores_gemma":[0.06352507,0.07555443,0.6693864,0.002187282,0.0006467637,0.003932013,0.03095341,0.00209368,0.1517209],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.03157678,"threshold_uncertainty_score":0.1056349,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06355862030086441,"score_gpt":0.2731416649700737,"score_spread":0.2095830446692093,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}