{"id":"W4232938695","doi":"10.22215/etd/2011-09734","title":"A semantically enabled framework for small molecule metabolic fate prediction : the Web as a biochemical reactor","year":2011,"lang":"en","type":"dissertation","venue":"","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Library and Archives Canada","funders":"European Bioinformatics Institute","keywords":"Computer science; World Wide Web; Information retrieval","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001869658,0.001199594,0.001087192,0.001509391,0.0008355006,0.003495241,0.002502376,0.001633045,0.003545302],"category_scores_gemma":[0.002686972,0.0007477814,0.002498806,0.001117534,0.0008710353,0.003901707,0.002343303,0.001875809,0.002060434],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000958812,"about_ca_system_score_gemma":0.001890957,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01026328,"about_ca_topic_score_gemma":0.01495057,"domain_scores_codex":[0.9991953,0.0001691906,0.00009128645,0.0001856208,0.0002936456,0.00006503474],"domain_scores_gemma":[0.9990646,0.0004053283,0.00005693371,0.0002680482,0.0001177464,0.00008727468],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.001523871,0.001158809,0.00761846,0.001813107,0.0008888296,0.002211911,0.0008066522,0.2677373,0.03423864,0.2185839,0.05589036,0.407528],"study_design_scores_gemma":[0.00007431841,0.00005682338,0.0006072134,0.0001369051,0.0001210608,0.0001809274,0.00009029385,0.8757184,0.01132546,0.07255203,0.03907518,0.00006135787],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"other","genre_scores_codex":[0.008029034,0.0005838225,0.9110609,0.0004429069,0.00008789856,0.0001618078,0.002257035,0.0739728,0.003403731],"genre_scores_gemma":[0.1514539,0.00114284,0.8297109,0.0004228638,0.00006061084,0.0003887172,0.009375616,0.003203861,0.004240651],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.01026328,"threshold_uncertainty_score":0.02040702,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009548492122468041,"score_gpt":0.2347124492314859,"score_spread":0.2251639571090179,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}