{"id":"W4233020651","doi":"10.3410/f.12662957.13913055","title":"Faculty Opinions recommendation of In vitro transcription profiling of the σS subunit of bacterial RNA polymerase: re-definition of the σS regulon and identification of σS-specific promoter sequence elements.","year":2011,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"McMaster University","funders":"","keywords":"Regulon; RNA polymerase; Computational biology; Transcription (linguistics); Profiling (computer programming); Promoter; Biology; Consensus sequence; Polymerase; Genetics; Molecular biology; RNA; Transcription factor; Gene; Computer science; Base sequence; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.001592024,0.002902356,0.001806499,0.004189628,0.0007911364,0.002434772,0.002930237,0.003114233,0.0298034],"category_scores_gemma":[0.009283894,0.0007288185,0.001923454,0.006186141,0.0003754513,0.00125688,0.001746509,0.002145418,0.03950638],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001593016,"about_ca_system_score_gemma":0.003044176,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.03068232,"about_ca_topic_score_gemma":0.06827115,"domain_scores_codex":[0.998153,0.0002842914,0.0002045077,0.0005783205,0.0005715264,0.0002083218],"domain_scores_gemma":[0.9957049,0.001484743,0.0005145526,0.0008448079,0.0009829906,0.0004680397],"domain_codex":null,"domain_gemma":"evaluation","domain_candidate":"evaluation","domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002602055,0.00006853217,0.003473693,0.002481662,0.0001984104,0.00006542199,0.00002753703,0.0007920218,0.0005124615,0.0003505255,0.9861673,0.00560233],"study_design_scores_gemma":[0.0006609926,0.00005047887,0.02046298,0.00060601,0.0002541617,0.0001380131,0.00007470225,0.001867776,0.001714539,0.001010367,0.9730884,0.00007157095],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"commentary","genre_scores_codex":[0.0003110444,0.0001322501,0.00006815523,0.0000752764,0.00002181853,0.0000101927,0.9986266,0.0003079194,0.0004468021],"genre_scores_gemma":[0.0005411317,0.00007538711,0.0002583796,0.00004391323,0.000004995137,0.00003500474,0.9986333,0.00003740127,0.0003704789],"genre_candidate":"commentary","genre_consensus":null,"teacher_disagreement_score":0.998408,"threshold_uncertainty_score":0.0997023,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04066972730033173,"score_gpt":0.3074169052533177,"score_spread":0.266747177952986,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}