{"id":"W4233609419","doi":"10.21203/rs.2.11224/v4","title":"Epidemiology and Antibiotic Susceptibility of Vibrio cholerae Associated with the 2017 Outbreak in Kasese district","year":2019,"lang":"en","type":"preprint","venue":"Research Square","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"African Academy of Sciences; New Partnership for Africa's Development; Government of the United Kingdom; Alliance for Accelerating Excellence in Science in Africa; International Development Research Centre; Wellcome Trust","keywords":"Outbreak; Vibrio cholerae; Cholera; Ampicillin; Sulfamethoxazole; Gentamicin; Serotype; Medicine; Microbiology; Trimethoprim; Antibiotics; Antibiotic resistance; Veterinary medicine; El Tor; Virology; Biology; Bacteria","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003613256,0.0002766478,0.0002983459,0.001229509,0.000760513,0.0008245077,0.0006004951,0.0004822987,0.0015268],"category_scores_gemma":[0.001506243,0.0003766188,0.0003328542,0.001934483,0.0007664304,0.0004495759,0.001025686,0.0007301223,0.0001908501],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00138501,"about_ca_system_score_gemma":0.003138151,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.09366082,"about_ca_topic_score_gemma":0.06431766,"domain_scores_codex":[0.9992793,0.00009541319,0.00007288974,0.0001321819,0.0001511509,0.0002690566],"domain_scores_gemma":[0.9989675,0.0001002888,0.0003526581,0.0000394065,0.0002929907,0.0002471688],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00009775729,0.00004760391,0.9952667,0.00003151354,0.00002854256,0.0004478304,0.000831819,0.0001106192,0.001804579,0.00008085149,0.000209793,0.00104255],"study_design_scores_gemma":[0.000002039512,0.00006586676,0.9950908,0.00001207997,0.00001227359,0.0003137327,0.0039087,0.0001004136,0.0001985553,0.00003101138,0.0002564725,0.000008152792],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.99924,0.00005726349,0.00002958828,0.00005382491,0.000004814898,0.000006999305,0.0002512136,0.000001914513,0.0003545051],"genre_scores_gemma":[0.9993882,0.0001107909,0.00004183324,0.00001761384,0.000005720432,0.000004237133,0.0002632416,0.000001614855,0.0001666502],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09366082,"threshold_uncertainty_score":0.1862313,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06861186060767531,"score_gpt":0.3923820725091421,"score_spread":0.3237702119014668,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}