{"id":"W4235781239","doi":"10.2172/1033125","title":"Experimental Definition and Validation of Protein Coding Transcripts in Chlamydomonas reinhardtii","year":2012,"lang":"en","type":"report","venue":"","topic":"Photoreceptor and optogenetics research","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Office of Science; New York University Abu Dhabi; Biological and Environmental Research; Jane Coffin Childs Memorial Fund for Medical Research; York University; U.S. Department of Energy; National Science Foundation","keywords":"Chlamydomonas reinhardtii; Metabolic network; Biochemical engineering; Computer science; Metabolic engineering; Flux balance analysis; Biofuel; Metabolic flux analysis; In silico; Systems biology; Chlamydomonas; Resource (disambiguation); Computational biology; Biology; Biotechnology; Engineering; Gene; Metabolism","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001015557,0.0005381826,0.0002953534,0.0003457011,0.0007967019,0.0005818723,0.0005754972,0.000557249,0.0002695961],"category_scores_gemma":[0.002028861,0.0003527411,0.0007481516,0.0005731095,0.0007518299,0.0003603251,0.0006716544,0.0007799178,0.0002573311],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001401882,"about_ca_system_score_gemma":0.001875246,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01352561,"about_ca_topic_score_gemma":0.01403141,"domain_scores_codex":[0.9991652,0.0000932548,0.00009878088,0.0003267917,0.000216655,0.00009940042],"domain_scores_gemma":[0.9986402,0.0005679594,0.0002118234,0.0002831573,0.0002162682,0.00008053738],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004277991,0.00002489292,0.001896442,0.00006670185,0.000008527779,0.0000495429,0.00009638532,0.002389064,0.9920822,0.0006172621,0.00003702706,0.002689033],"study_design_scores_gemma":[0.00001242163,0.0001765369,0.01160561,0.00001773235,0.00004524717,0.0001483672,0.0001395651,0.01109113,0.9730015,0.0006253057,0.003108356,0.00002821971],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9086343,0.0006470138,0.08224951,0.0002182737,0.00006144346,0.0001258922,0.006253471,0.0004538455,0.001356281],"genre_scores_gemma":[0.8879201,0.0007651476,0.1004558,0.0001192427,0.000006559407,0.0001638401,0.009223157,0.0002175005,0.001128527],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01352561,"threshold_uncertainty_score":0.02689373,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.258809908626464,"score_gpt":0.3748823708085676,"score_spread":0.1160724621821036,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}