{"id":"W4236113206","doi":"10.21203/rs.3.rs-536711/v1","title":"Genomic Resources of Broomcorn Millet: Demonstration and Application of a High-throughput BAC Mapping Pipeline","year":2021,"lang":"en","type":"preprint","venue":"Research Square","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Chinese Academy of Sciences","keywords":"Biology; Genome; Shotgun sequencing; Reference genome; Illumina dye sequencing; Sequence assembly; Bacterial artificial chromosome; Computational biology; DNA sequencing; Genetics; Gene; Transcriptome","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001291121,0.000891514,0.0006191187,0.001495244,0.0006511283,0.001112003,0.001210884,0.0009143409,0.003646217],"category_scores_gemma":[0.001998987,0.0007681355,0.0009407009,0.001307714,0.0002628097,0.0007092451,0.001274872,0.001256382,0.003155239],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005261753,"about_ca_system_score_gemma":0.0009288373,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003410592,"about_ca_topic_score_gemma":0.004907275,"domain_scores_codex":[0.999168,0.00008438056,0.00007701901,0.0003055573,0.0002606424,0.0001043861],"domain_scores_gemma":[0.9988552,0.0003105298,0.0001574071,0.0002152951,0.0002928952,0.0001685866],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004169464,0.0001107383,0.003069025,0.0002992827,0.00005473115,0.0007829157,0.0002210127,0.001205812,0.9450403,0.0004922418,0.002436433,0.04587046],"study_design_scores_gemma":[0.0001860247,0.0005850607,0.03887089,0.0001364914,0.000297914,0.002048702,0.0002334255,0.02219189,0.8779197,0.000903315,0.05648991,0.0001367151],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.4393841,0.001251698,0.4901618,0.000979155,0.0002153522,0.001851913,0.03827817,0.02083149,0.00704641],"genre_scores_gemma":[0.2518649,0.0008704952,0.6228662,0.0004544641,0.00006880928,0.000866384,0.1123993,0.002530527,0.00807891],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.003646217,"threshold_uncertainty_score":0.01219785,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02749481924216011,"score_gpt":0.3119775939193312,"score_spread":0.284482774677171,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}