{"id":"W4239641275","doi":"10.1093/nar/gkn778","title":"Mouse Phenome Database","year":2008,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":87,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Center for Research Resources; National Institute of General Medical Sciences; National Human Genome Research Institute; National Institute of Mental Health; National Institute on Aging; Pfizer; Natural Sciences and Engineering Research Council of Canada; National Science Foundation; Takeda Oncology; National Institutes of Health; National Institute on Deafness and Other Communication Disorders; Centre National de la Recherche Scientifique; Hebrew University of Jerusalem; American Liver Foundation; Wellcome Trust; National Heart, Lung, and Blood Institute; National Alopecia Areata Foundation; Japan Heart Foundation; National Health and Medical Research Council; AstraZeneca; American Health Assistance Foundation; Bristol-Myers Squibb; GlaxoSmithKline; Ellison Medical Foundation; American Heart Association; Deutsche Forschungsgemeinschaft; Andrew W. Mellon Foundation; U.S. Department of Veterans Affairs; U.S. Department of Defense; Medical Research Council; Medical Research Council Canada; March of Dimes Foundation","keywords":"Phenome; Biology; In silico; Phenotype; Database; Trait; Computational biology; Bioinformatics; Genetics; Computer science; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017266,0.001548987,0.001738172,0.005774842,0.0009126784,0.00187709,0.002950125,0.001401809,0.05044147],"category_scores_gemma":[0.003480269,0.0007328378,0.001163911,0.004523972,0.0002809606,0.001590617,0.002342592,0.001500358,0.03406322],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006923088,"about_ca_system_score_gemma":0.001471766,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001636329,"about_ca_topic_score_gemma":0.00297074,"domain_scores_codex":[0.9991042,0.0001365473,0.0001949963,0.0002222943,0.0002594678,0.00008244845],"domain_scores_gemma":[0.9982902,0.0003709679,0.0002933438,0.0004886623,0.0003014972,0.0002553211],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.002017469,0.0002642785,0.007368756,0.004676247,0.0005953289,0.00116269,0.0002152293,0.002799888,0.0387922,0.01356251,0.8420599,0.08648555],"study_design_scores_gemma":[0.000287821,0.0001231185,0.007766894,0.0002777676,0.0003519166,0.001357822,0.00005338863,0.002356478,0.009430218,0.0109387,0.9669712,0.00008465724],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"software","genre_scores_codex":[0.004614163,0.001521106,0.01834472,0.0004492033,0.0001461193,0.0002606727,0.949559,0.01538222,0.009722847],"genre_scores_gemma":[0.005276784,0.001036845,0.01554596,0.0003056608,0.00002881465,0.0006312897,0.9729881,0.001238321,0.002948331],"genre_candidate":"software","genre_consensus":null,"teacher_disagreement_score":0.05044147,"threshold_uncertainty_score":0.1687436,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04916706196582018,"score_gpt":0.3164931353583108,"score_spread":0.2673260733924906,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}