{"id":"W4243099393","doi":"10.1128/jvi.02204-09","title":"HLA-Associated Viral Mutations Are Common in Human Immunodeficiency Virus Type 1 Elite Controllers","year":2009,"lang":"en","type":"article","venue":"Journal of Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"ca_institutions":"AIDS Vancouver","funders":"","keywords":"Biology; Virology; Human leukocyte antigen; Human immunodeficiency virus (HIV); Mutation; Genetics; Gene; Antigen","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003801604,0.0003154751,0.0002874191,0.001254995,0.00057156,0.00113997,0.0004962658,0.000634865,0.007782708],"category_scores_gemma":[0.002206799,0.0001352898,0.000211281,0.000800362,0.0003161444,0.0004999039,0.0004507498,0.0006077077,0.0005013155],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001413239,"about_ca_system_score_gemma":0.0001131636,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004033867,"about_ca_topic_score_gemma":0.0003936962,"domain_scores_codex":[0.9996176,0.00005402384,0.00004056197,0.00008211282,0.00008128428,0.0001245188],"domain_scores_gemma":[0.9988171,0.0005066594,0.0003201134,0.0001099676,0.00007212193,0.0001741102],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002806223,0.0006945633,0.7431107,0.0001455821,0.000301945,0.009484382,0.0008403303,0.0006118806,0.1363928,0.001827207,0.001402698,0.1023817],"study_design_scores_gemma":[0.0001521361,0.001407941,0.943253,0.0000631968,0.0002489875,0.03590993,0.001005766,0.001357758,0.01072289,0.001711879,0.004122776,0.00004363843],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981699,0.0003353179,0.0002144383,0.00001901327,0.00001069999,0.000009995181,0.0001143665,0.00001432521,0.001111952],"genre_scores_gemma":[0.9992303,0.0001045693,0.00007474643,0.00004098576,0.00001618705,0.000005285674,0.000127929,0.000006339641,0.0003936609],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007782708,"threshold_uncertainty_score":0.02603573,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01496435988679014,"score_gpt":0.3012281780899045,"score_spread":0.2862638182031144,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}