{"id":"W4243112516","doi":"10.3410/f.735919112.793577885","title":"Faculty Opinions recommendation of Anaerobic hydrocarbon degradation in candidate phylum 'Atribacteria' (JS1) inferred from genomics.","year":2020,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Fundamental Research Funds for the Central Universities; State Key Laboratory of Bioreactor Engineering; National Natural Science Foundation of China","keywords":"Metagenomics; Phylum; Biology; Ecology; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002196214,0.0005784869,0.0003638,0.001597198,0.00124343,0.002624456,0.0006608003,0.001140435,0.2093848],"category_scores_gemma":[0.00936242,0.0003691537,0.0005123568,0.002571349,0.0003467899,0.001688058,0.001166784,0.001683619,0.07299518],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001141549,"about_ca_system_score_gemma":0.004698787,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005097257,"about_ca_topic_score_gemma":0.01238991,"domain_scores_codex":[0.9986602,0.0001246426,0.00009474457,0.0002132989,0.000771432,0.0001356804],"domain_scores_gemma":[0.9922553,0.0005847925,0.0006623064,0.0006488694,0.004091105,0.00175761],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000367518,0.000124114,0.01196441,0.0009237335,0.00006932172,0.0004069202,0.0004450674,0.0005829805,0.05248115,0.003070745,0.6638702,0.2656939],"study_design_scores_gemma":[0.00002277883,0.00005650809,0.01569636,0.0001341471,0.00004259089,0.00009220748,0.0003185224,0.0006965106,0.007220171,0.001196851,0.9744933,0.00003002949],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"other","genre_gemma":"dataset","genre_scores_codex":[0.08207796,0.005341503,0.03602909,0.07968238,0.05276781,0.001246784,0.1661506,0.01235654,0.5643474],"genre_scores_gemma":[0.1851085,0.01157744,0.05880696,0.01099481,0.01020935,0.0004781141,0.1683594,0.004790618,0.5496748],"genre_candidate":"dataset","genre_consensus":null,"teacher_disagreement_score":0.2093848,"threshold_uncertainty_score":0.7004619,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02075988016439468,"score_gpt":0.3019040868173745,"score_spread":0.2811442066529798,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}