{"id":"W4243538010","doi":"10.1099/jmm.0.000006","title":"Genetic and antigenic characterization of Canadian invasive Neisseria meningitidis serogroup C (MenC) case isolates in the post-MenC conjugate vaccine era, 2009–2013","year":2015,"lang":"en","type":"article","venue":"Journal of Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Ontario; University of Toronto; Institut National de Santé Publique du Québec; Saskatchewan Disease Control Laboratory; Provincial Laboratory of Public Health; Manitoba Health; BC Mental Health & Substance Use Services; Public Health Agency of Canada","funders":"European Commission; Wellcome Trust","keywords":"Neisseria meningitidis; Biology; Serotype; Gene; Conjugate vaccine; Antigen; Neisseria; Genetics; Microbiology; Bacteria; Immunization","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008991873,0.0001561768,0.0004284489,0.000471735,0.00008606265,0.00001748649,0.00024522,0.0003933356,0.0005148789],"category_scores_gemma":[0.0002884242,0.0001020817,0.00006246856,0.0002822925,0.0001342424,0.0001082852,0.00005286104,0.0004361724,0.00001731068],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003528456,"about_ca_system_score_gemma":0.0004630566,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.03207647,"about_ca_topic_score_gemma":0.05758667,"domain_scores_codex":[0.9983724,0.0004610329,0.000698162,0.0001459176,0.000018154,0.0003042903],"domain_scores_gemma":[0.9989374,0.0001669198,0.0003843444,0.0001279931,0.0002633601,0.0001199615],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001349473,0.00007992961,0.01422098,0.00001377397,0.000120196,0.0001559377,0.001064314,8.082064e-7,0.981849,0.00004142087,0.001447989,0.0008707147],"study_design_scores_gemma":[0.01702134,0.008078947,0.4165781,0.0005663405,0.0004828984,0.3631087,0.00562779,0.00003032148,0.09299334,0.0003222456,0.0942765,0.000913507],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9913171,0.00221793,0.00001296386,0.005247003,0.0009604439,0.0001642842,0.00006657762,0.000003883958,0.000009824398],"genre_scores_gemma":[0.9979134,0.001346133,0.0000502541,0.0004769116,0.0001101279,0.00000340857,0.00007006656,0.000009181914,0.00002058467],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8888556,"threshold_uncertainty_score":0.974369,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01367128948512942,"score_gpt":0.2354886651517648,"score_spread":0.2218173756666353,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}