{"id":"W4244472111","doi":"10.1023/b:gene.0000017634.17098.aa","title":"A Reanalysis of Protein Polymorphism in Drosophila Melanogaster, D. Simulans, D. Sechellia and D. Mauritiana: Effects of Population Size and Selection","year":2004,"lang":"en","type":"article","venue":"Genetica","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"ca_institutions":"McMaster University","funders":"","keywords":"Mauritiana; Biology; Melanogaster; Drosophila melanogaster; Genetics; Nonsynonymous substitution; Population; Introgression; Evolutionary biology; Chromosome; Drosophila (subgenus); Gene; Genome; Botany","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006217851,0.00009712857,0.000160479,0.00006794086,0.0000264774,0.000005956559,0.00004603953,0.0001361598,0.000006310708],"category_scores_gemma":[0.00004924037,0.0001027899,0.0000336138,0.0001210048,0.00005833917,0.000002986476,0.00004585835,0.00004247136,2.417221e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006386509,"about_ca_system_score_gemma":0.00001487214,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002805787,"about_ca_topic_score_gemma":0.0001201709,"domain_scores_codex":[0.9993578,0.00004411051,0.0001829564,0.0002114645,0.0001013507,0.0001023717],"domain_scores_gemma":[0.9997156,0.0000101859,0.00008741078,0.0001075327,0.00003645254,0.00004281378],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00007544785,0.00003356145,0.03946784,0.0001478493,0.00004316809,0.000001649529,0.0001527017,0.001370005,0.957324,0.0001581659,0.000003129762,0.001222441],"study_design_scores_gemma":[0.001564816,0.0003533875,0.5638765,0.00006562216,0.0000815051,0.000009029924,0.00004463705,0.00009948207,0.431464,0.002204227,0.00008403084,0.0001527921],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983529,0.001052626,0.0002495943,0.00007099624,0.00001593606,0.0002101196,0.00001036569,0.00000285947,0.00003454952],"genre_scores_gemma":[0.9968596,0.0001434016,0.002856332,0.00002711243,0.00002485775,0.000003457393,0.00002821569,0.000007098341,0.00004999827],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5258601,"threshold_uncertainty_score":0.4191649,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003156442240445381,"score_gpt":0.2020070696117461,"score_spread":0.1988506273713008,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}