{"id":"W4246537995","doi":"10.17504/protocols.io.74hhqt6","title":"Om-mCherry-hsp90 v1","year":2019,"lang":"en","type":"preprint","venue":"","topic":"Microbial Inactivation Methods","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"","keywords":"mCherry; Hsp90; Computer science; Biology; Genetics; Heat shock protein; Green fluorescent protein","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002928666,0.0002435017,0.0002295168,0.00004654042,0.00002529165,0.00004254747,0.0003708528,0.0007217147,0.000575692],"category_scores_gemma":[0.00013695,0.0002346331,0.0001519377,0.0000397236,0.00003789219,9.798983e-7,0.0009226523,0.0003360591,0.0001870995],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002772584,"about_ca_system_score_gemma":0.0001982225,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006164061,"about_ca_topic_score_gemma":0.00001229478,"domain_scores_codex":[0.9987472,0.0001244047,0.0002315152,0.0005982902,0.00009672721,0.0002018847],"domain_scores_gemma":[0.998763,0.0000128687,0.0001431571,0.0008920706,0.0001314956,0.00005739478],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002342999,0.00002943349,0.000243565,0.0000684524,0.00007093642,5.897376e-7,0.00001538537,0.0003141282,0.9482015,0.0001738132,0.04960746,0.001251259],"study_design_scores_gemma":[0.0001836634,0.00004506323,0.0003754274,0.00002075331,0.00001660937,0.000004312321,0.00001927167,0.00005119831,0.7524871,0.0003244342,0.2461403,0.0003318619],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6689189,0.0008673079,0.1498483,0.0008416223,0.002766403,0.0009561193,0.00008378452,0.00008636493,0.1756312],"genre_scores_gemma":[0.7615639,0.0004117634,0.09154467,0.002871642,0.001507664,0.00005448341,0.001190879,0.000129715,0.1407253],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1965328,"threshold_uncertainty_score":0.9568062,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03030067742554101,"score_gpt":0.3330555051260671,"score_spread":0.3027548277005261,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}