{"id":"W4248266588","doi":"10.1186/s12864-021-07474-9","title":"Identification of 11 candidate structured noncoding RNA motifs in humans by comparative genomics","year":2021,"lang":"en","type":"article","venue":"BMC Genomics","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"Huaqiao University; Natural Science Foundation of Fujian Province; National Natural Science Foundation of China; York University; Yale University","keywords":"Biology; Genome; Non-coding RNA; Computational biology; RNA; Genetics; Gene; Genomics; Identification (biology); Comparative genomics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005181659,0.0003599322,0.0003847941,0.00178521,0.0003798143,0.0004450252,0.0003290087,0.0005379592,0.002552303],"category_scores_gemma":[0.0007765726,0.0001786843,0.0006991402,0.0009646721,0.0002407365,0.0001929431,0.0003238444,0.0002400175,0.0005684705],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002511581,"about_ca_system_score_gemma":0.0003683854,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008455637,"about_ca_topic_score_gemma":0.001294496,"domain_scores_codex":[0.9996306,0.0000550363,0.00002740463,0.000191618,0.00005463056,0.00004074161],"domain_scores_gemma":[0.9996477,0.0001559562,0.0000759262,0.00002850397,0.00004497157,0.0000469917],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001437592,0.0001997814,0.1824421,0.0007035108,0.0005667643,0.002263563,0.0003730505,0.003689235,0.672137,0.00175973,0.003116609,0.1313111],"study_design_scores_gemma":[0.000245082,0.001153322,0.7060491,0.0001904504,0.0009210253,0.01150141,0.0004460818,0.06781568,0.1799068,0.00377278,0.02784414,0.0001540318],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9552642,0.001702867,0.03569268,0.0001403236,0.0000288755,0.00009028935,0.004631073,0.0006195565,0.001830148],"genre_scores_gemma":[0.9152415,0.0002841635,0.07387131,0.0001716973,0.00003724489,0.00007535826,0.009540355,0.0001138969,0.0006645046],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002552303,"threshold_uncertainty_score":0.008538306,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02057228981991127,"score_gpt":0.2613020018244387,"score_spread":0.2407297120045274,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}