{"id":"W4248363601","doi":"","title":"COMMENTARY Structure and dynamics of transcriptionally active chromatin","year":2015,"lang":"en","type":"review","venue":"","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":64,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria","funders":"","keywords":"Chromatin; Biology; Nucleosome; Histone; Bivalent chromatin; Histone-modifying enzymes; DNA; Computational biology; Transcription (linguistics); ChIP-sequencing; Chromatin remodeling; Scaffold/matrix attachment region; Function (biology); ChIA-PET; Genetics; Cell biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007542346,0.0002840489,0.0006942861,0.0000461892,0.000026641,0.00001193853,0.000209396,0.0003546795,0.00003496565],"category_scores_gemma":[0.000006695644,0.0002355433,0.0001700799,0.00005033421,0.00009014253,0.00000218926,0.0001158735,0.0001299395,6.014948e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005063198,"about_ca_system_score_gemma":0.0001597065,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001942383,"about_ca_topic_score_gemma":0.0001739475,"domain_scores_codex":[0.9990538,0.00005815656,0.0003588693,0.0002866575,0.0001087057,0.0001338021],"domain_scores_gemma":[0.9993405,0.000009012516,0.0002266652,0.0002769803,0.00007139155,0.00007538647],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001783573,0.00006784163,0.000007181598,0.007677197,0.0006574097,0.00000186476,0.00004532544,0.00000607598,0.0006183148,0.0008083221,0.004738032,0.9853546],"study_design_scores_gemma":[0.0002966976,0.0001913107,0.000009070405,0.0005547401,0.000371917,0.00006102947,0.00006107734,0.0001344838,0.0000613035,0.0004147504,0.9974775,0.0003661562],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001883196,0.9946694,0.0002018916,0.00005630706,0.00009596811,0.0003636167,0.002216117,0.000005112454,0.0005083619],"genre_scores_gemma":[0.0004051511,0.9906612,0.00189492,0.0001049988,0.00008432609,0.000009949713,0.006642313,0.00004077472,0.0001563915],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9927394,"threshold_uncertainty_score":0.9605176,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.012452501909782,"score_gpt":0.2677570469987476,"score_spread":0.2553045450889657,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}