{"id":"W4249169106","doi":"10.1002/9780470015902.a0005091.pub2","title":"Phylogenetic Footprinting","year":2008,"lang":"en","type":"other","venue":"Encyclopedia of Life Sciences","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Footprinting; Phylogenetic tree; Phylogenetic network; Biology; Phylogenetics; Gene; Evolutionary biology; DNA footprinting; Genetics; Computational biology; Base sequence; Promoter; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001403329,0.001346252,0.001365573,0.002805779,0.001271039,0.001509337,0.001947269,0.0009479116,0.0680411],"category_scores_gemma":[0.001620608,0.0008502346,0.001227638,0.003328634,0.0006883866,0.00130582,0.001321891,0.00281245,0.02561932],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005118854,"about_ca_system_score_gemma":0.0006504668,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001083354,"about_ca_topic_score_gemma":0.001734604,"domain_scores_codex":[0.998536,0.0003460556,0.00008434118,0.0004065311,0.0004523377,0.0001747462],"domain_scores_gemma":[0.9990317,0.000303747,0.00007525409,0.0002985733,0.0001888203,0.0001019463],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001163449,0.0002822404,0.001900514,0.002673168,0.0002194458,0.0006410098,0.0003611972,0.002741372,0.6055971,0.03486082,0.09684894,0.2527108],"study_design_scores_gemma":[0.0001572981,0.0002293365,0.001660865,0.0001889119,0.0001452688,0.001091898,0.0001442135,0.01075529,0.4474131,0.01226206,0.5258689,0.00008291948],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"other","genre_scores_codex":[0.04278148,0.006256184,0.7615461,0.001586454,0.001771381,0.0008662118,0.05644,0.02887058,0.09988166],"genre_scores_gemma":[0.1622513,0.005568656,0.6593302,0.0009438305,0.0002181806,0.001120225,0.08756958,0.005424418,0.0775736],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.0680411,"threshold_uncertainty_score":0.2276202,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01449881548541366,"score_gpt":0.2443488136565624,"score_spread":0.2298499981711487,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}