{"id":"W4251757096","doi":"10.21203/rs.2.10611/v4","title":"Comparative Genomics of Multidrug-Resistant Enterococcus spp. isolated from Wastewater Treatment Plants","year":2019,"lang":"en","type":"preprint","venue":"Research Square","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Ontario; Toronto Metropolitan University; Queen's University; Agriculture and Agri-Food Canada; Canadian Food Inspection Agency","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Queen's University","keywords":"Enterococcus; Multiple drug resistance; Biology; Genomics; Biotechnology; Microbiology; Genetics; Drug resistance; Genome; Gene; Antibiotics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001260741,0.0003329825,0.0003944344,0.001059117,0.0002348054,0.0004797845,0.0001644068,0.0002740781,0.001031733],"category_scores_gemma":[0.0003301036,0.0001218149,0.0005171889,0.00132878,0.0001285188,0.0001649905,0.0003965567,0.0002539759,0.0003017336],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002333355,"about_ca_system_score_gemma":0.0002362326,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001864339,"about_ca_topic_score_gemma":0.001557454,"domain_scores_codex":[0.9998487,0.00001582669,0.0000125051,0.00005344285,0.00003045448,0.00003897558],"domain_scores_gemma":[0.9997756,0.00005344822,0.00005614134,0.00001247361,0.00005876816,0.00004354801],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003825859,0.00006072184,0.01079203,0.0001428111,0.00004359493,0.0001500138,0.0002341341,0.0001980707,0.9832998,0.00004775481,0.00008686232,0.004561624],"study_design_scores_gemma":[0.00002999441,0.0008618823,0.8348318,0.00006472944,0.0002165707,0.001755733,0.001104323,0.002759575,0.1530858,0.0001794759,0.005079684,0.00003036349],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9946864,0.0003276108,0.0006582294,0.00003007288,0.000005627203,0.00001911616,0.003647663,0.00002142726,0.0006040777],"genre_scores_gemma":[0.9814174,0.0003345684,0.00291123,0.0000697497,0.000007982697,0.00004981698,0.01352836,0.00002931397,0.001651697],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001864339,"threshold_uncertainty_score":0.003706932,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05235706318364278,"score_gpt":0.3418934223945725,"score_spread":0.2895363592109297,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}