{"id":"W4253534330","doi":"10.1101/cshperspect.a018143","title":"Microbial Speciation","year":2015,"lang":"en","type":"review","venue":"Cold Spring Harbor Perspectives in Biology","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":83,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"National Institute of Environmental Health Sciences; Scheme for Promotion of Academic and Research Collaboration; Canada Research Chairs; Natural Sciences and Engineering Research Council of Canada; Broad Institute; Gordon and Betty Moore Foundation; National Science Foundation","keywords":"Biology; Library science; Environmental ethics; Philosophy; Computer science","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0005741147,0.0003617629,0.001182421,0.0001701456,0.0001074921,0.00001213674,0.000740785,0.0007127497,0.002181608],"category_scores_gemma":[0.0001473977,0.0003443655,0.0002005978,0.000365791,0.0005363346,0.00006603028,0.0007002549,0.0009217415,0.00143016],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001511606,"about_ca_system_score_gemma":0.0001016241,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003459204,"about_ca_topic_score_gemma":0.0007967195,"domain_scores_codex":[0.997566,0.000875382,0.0004241232,0.0006292714,0.00004946844,0.0004557443],"domain_scores_gemma":[0.9989054,0.0002048189,0.0002602762,0.0005378119,0.00001594664,0.00007572502],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000453898,0.005463976,0.009703261,0.006464419,0.001588179,0.0003093942,0.009694482,0.000200233,0.0200295,0.4372124,0.04935329,0.459527],"study_design_scores_gemma":[0.0001851151,0.00008522985,0.0005027768,0.0002299748,0.0000525976,0.000002636902,0.00002786205,0.000001873748,0.000004332284,0.0002579984,0.998304,0.0003455912],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0008935541,0.9930923,0.00001319438,0.00002983834,0.000570595,0.000598952,0.0000320119,0.00005135716,0.004718176],"genre_scores_gemma":[0.001527135,0.9975964,0.0003209295,0.00004634072,0.0002445124,0.00005845476,0.00001842794,0.00003569503,0.0001520564],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9489507,"threshold_uncertainty_score":0.9999008,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04454716179625896,"score_gpt":0.3291563750520017,"score_spread":0.2846092132557428,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}