{"id":"W4256507157","doi":"10.20944/preprints201807.0397.v1","title":"Genome-Wide Association Study and Selection Signatures Detect Genomic Regions Associated with Seed Yield and Oil Quality in Flax","year":2018,"lang":"en","type":"preprint","venue":"Preprints.org","topic":"Soybean genetics and cultivation","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"Genome Prairie; Agriculture and Agri-Food Canada; Western Grains Research Foundation; Saskatchewan Flax Development Commission; Salesforce; Genome Canada","keywords":"Genome-wide association study; Biology; Quantitative trait locus; Genome; Single-nucleotide polymorphism; Genetics; Genetic association; Gene; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005550021,0.0003499912,0.0003934861,0.0008839681,0.0003164466,0.0003454555,0.0001748265,0.0003573379,0.001710523],"category_scores_gemma":[0.0004208281,0.0001645381,0.0007475152,0.001178557,0.0002162552,0.0001026638,0.0003368142,0.0003879241,0.0001842755],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001714455,"about_ca_system_score_gemma":0.0002055896,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00221224,"about_ca_topic_score_gemma":0.003762537,"domain_scores_codex":[0.9996281,0.00005865042,0.00002234879,0.000204898,0.00003573503,0.00005016948],"domain_scores_gemma":[0.9996512,0.0001262975,0.000106915,0.00003184806,0.00002188023,0.00006179803],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002964288,0.0001852464,0.4940096,0.0001714037,0.001331974,0.0009932583,0.0004702757,0.0005467449,0.4842327,0.0001849769,0.0003446725,0.01456484],"study_design_scores_gemma":[0.00002997134,0.0001183172,0.9957536,0.000004997219,0.0002163091,0.0002646825,0.00006146242,0.0005434924,0.002576981,0.00003881491,0.0003832627,0.000008101816],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976936,0.0002098464,0.001010598,0.00002368415,0.000003789391,0.000007241783,0.0008350621,0.00002913508,0.0001870565],"genre_scores_gemma":[0.9958902,0.00009949406,0.002018641,0.00004184343,0.000006849304,0.00001842921,0.00156911,0.00001892799,0.0003365525],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00221224,"threshold_uncertainty_score":0.005722284,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08091868907681868,"score_gpt":0.288783900903266,"score_spread":0.2078652118264473,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}