{"id":"W4280510082","doi":"10.1038/s42003-022-03394-w","title":"Genomic biosurveillance detects a sexual hybrid in the sudden oak death pathogen","year":2022,"lang":"en","type":"article","venue":"Communications Biology","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"FPInnovations; Canadian Food Inspection Agency; University of British Columbia","funders":"Natural Resources Canada; FPInnovations; Genome British Columbia; Canadian Food Inspection Agency; Genome Canada","keywords":"Biology; Phytophthora ramorum; Genetics; Genome; Genotype; Reproductive isolation; Oomycete; Evolutionary biology; Phytophthora; Gene; Population","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000226095,0.0001920516,0.0001650769,0.0004946587,0.0001841189,0.0003928703,0.0001510242,0.0004270237,0.0008921819],"category_scores_gemma":[0.0004004964,0.00007037027,0.00018268,0.0002671077,0.0001705897,0.0001275494,0.0002569307,0.0003193722,0.000189803],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001237169,"about_ca_system_score_gemma":0.00006928259,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005739398,"about_ca_topic_score_gemma":0.00104976,"domain_scores_codex":[0.9996846,0.00005060002,0.00001488494,0.0001030533,0.00008433357,0.00006247315],"domain_scores_gemma":[0.9997205,0.00007921527,0.00009491193,0.00001997386,0.00003587462,0.00004952922],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002725692,0.0001094874,0.1047758,0.00003399967,0.00004122042,0.000709808,0.0002800859,0.0002156441,0.8843318,0.0002097438,0.0001257799,0.008893993],"study_design_scores_gemma":[0.00002295746,0.00091056,0.8557173,0.00002230222,0.0001045162,0.004463417,0.001251513,0.003119043,0.1309294,0.0002990299,0.003138574,0.00002140123],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977419,0.00009197502,0.0009422411,0.0000270518,0.000007080417,0.00001545061,0.0003453726,0.00002275068,0.0008061064],"genre_scores_gemma":[0.9981432,0.00003965397,0.001000999,0.00005617988,0.000003208495,0.00000616522,0.0004660175,0.000005485448,0.0002791625],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008921819,"threshold_uncertainty_score":0.002984703,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04458148481634284,"score_gpt":0.2495311975147031,"score_spread":0.2049497126983603,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}