{"id":"W4280522918","doi":"10.1038/s41467-022-30218-6","title":"Large differences in carbohydrate degradation and transport potential among lichen fungal symbionts","year":2022,"lang":"en","type":"article","venue":"Nature Communications","topic":"Lichen and fungal ecology","field":"Agricultural and Biological Sciences","cited_by":51,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Uppsala Multidisciplinary Center for Advanced Computational Science; Directorate for Biological Sciences; Natural Sciences and Engineering Research Council of Canada; Ludwig-Maximilians-Universität München; Vetenskapsrådet; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; Austrian Science Fund; Canada Research Chairs; Svenska Forskningsrådet Formas; Deutsche Forschungsgemeinschaft; University of Alberta","keywords":"Lichen; Biology; Symbiosis; Fungus; Clade; Fungal protein; Ascomycota; Obligate; Gene; Botany; Phylogenetics; Bacteria; Biochemistry; Genetics; Saccharomyces cerevisiae","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001421172,0.0002128857,0.0002479538,0.0008247643,0.000319067,0.0006796055,0.0001111801,0.0003178025,0.001283436],"category_scores_gemma":[0.000440181,0.000109698,0.0001770461,0.000473701,0.0002438261,0.0003756477,0.0004763556,0.0001923366,0.0002789308],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002050951,"about_ca_system_score_gemma":0.0001047255,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008945339,"about_ca_topic_score_gemma":0.001108017,"domain_scores_codex":[0.9998357,0.00001779299,0.00001100358,0.00005869585,0.00003039994,0.00004640161],"domain_scores_gemma":[0.999563,0.0001278444,0.0001164151,0.00003505003,0.00004225724,0.0001152858],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003147648,0.00002155491,0.0940406,0.00009088901,0.00005097429,0.00009290854,0.0002624339,0.0001738266,0.8991774,0.0001386984,0.00003785607,0.005597967],"study_design_scores_gemma":[0.00001040339,0.0001457919,0.9593777,0.00001567539,0.00003115266,0.000391454,0.0004858151,0.0009594228,0.03715996,0.0002875884,0.00111809,0.00001688089],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991685,0.0001485701,0.0001459403,0.000008778727,8.256761e-7,0.000001050244,0.000224755,0.000008845259,0.0002927544],"genre_scores_gemma":[0.999068,0.000058589,0.0001910969,0.000009226203,0.000001172225,0.000002853349,0.0004297,0.000003755846,0.0002356892],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001283436,"threshold_uncertainty_score":0.004293501,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01498538193537836,"score_gpt":0.2242289323449696,"score_spread":0.2092435504095913,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}