{"id":"W4280563818","doi":"10.1146/annurev-phyto-021621-121935","title":"Diversity, Evolution, and Function of <i>Pseudomonas syringae</i> Effectoromes","year":2022,"lang":"en","type":"review","venue":"Annual Review of Phytopathology","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":54,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Pseudomonas syringae; Biology; Effector; Horizontal gene transfer; Virulence; Phylogenetic tree; Pathogen; Evolutionary biology; Phylogenetics; Genetics; Function (biology); Host (biology); Computational biology; Gene; Cell biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004367308,0.0005459241,0.0009614446,0.002553964,0.0002021954,0.000996432,0.0004629987,0.0007210961,0.002169111],"category_scores_gemma":[0.0005478883,0.0002571268,0.0003546627,0.002083582,0.0003554322,0.001240412,0.0004935342,0.0008378968,0.001216782],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004803522,"about_ca_system_score_gemma":0.001147244,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009242116,"about_ca_topic_score_gemma":0.001114988,"domain_scores_codex":[0.9998635,0.00001516568,0.0000196097,0.00003693836,0.00004790004,0.00001676967],"domain_scores_gemma":[0.9997235,0.0001167133,0.00005084415,0.000008709108,0.00007141062,0.00002877155],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00007899891,0.00003992345,0.0004586621,0.02120313,0.00008333562,0.0001502217,0.00007523852,0.0003691143,0.006766541,0.002584134,0.008340726,0.9598499],"study_design_scores_gemma":[0.00001118126,0.0001443902,0.003454375,0.003475555,0.0001720137,0.001292654,0.00009241619,0.00008691075,0.001924194,0.001248983,0.9880679,0.0000293176],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0004672931,0.9980854,0.0001653975,0.0002023347,0.00008011774,0.000004769674,0.00005035073,0.00001055771,0.0009338168],"genre_scores_gemma":[0.001398844,0.9978751,0.0001898422,0.00008195998,0.00005119503,0.000005040942,0.00005637907,0.00000161367,0.0003400464],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.002553964,"threshold_uncertainty_score":0.007256389,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02728010097511849,"score_gpt":0.2574332004028481,"score_spread":0.2301530994277296,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}