{"id":"W4281557415","doi":"10.3390/antibiotics11060715","title":"A qnrD-Plasmid Promotes Biofilm Formation and Class 1 Integron Gene Cassette Rearrangements in Escherichia coli","year":2022,"lang":"en","type":"article","venue":"Antibiotics","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Université de Reims Champagne-Ardenne; International Union of Biochemistry and Molecular Biology","keywords":"Biofilm; Integron; Plasmid; Microbiology; Escherichia coli; Biology; SOS response; Antibiotic resistance; Antibiotics; Bacteria; Gene; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002627989,0.0001649456,0.0001637149,0.00007254437,0.0001360571,0.00004208467,0.0001734902,0.0001057874,0.00002684326],"category_scores_gemma":[0.00004969843,0.0001747001,0.00003716833,0.0001715067,0.00007981696,0.0000121676,0.000263696,0.0001693887,0.000005829161],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005176038,"about_ca_system_score_gemma":0.00004971309,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003676091,"about_ca_topic_score_gemma":0.00009681202,"domain_scores_codex":[0.9988515,0.0001041352,0.0002776034,0.0003240333,0.0001634329,0.0002792948],"domain_scores_gemma":[0.9994934,0.0000100673,0.000126854,0.0002817614,0.00003670879,0.00005116732],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001007985,0.00009884751,0.0493412,0.00004899766,0.00002645749,0.00001649809,0.0001125925,0.00002040548,0.9478726,0.00007876036,0.001838734,0.0004441076],"study_design_scores_gemma":[0.00148295,0.0007970669,0.09067881,0.00005135456,0.00004003942,0.00006907395,0.0009235606,0.001992787,0.866277,0.00009631432,0.03701221,0.0005788212],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980963,0.0002153137,0.0002841353,0.0002788102,0.0002044821,0.0003161336,0.00006187597,0.00001472165,0.0005281563],"genre_scores_gemma":[0.9959318,0.0002401167,0.002827086,0.0002960679,0.0000595606,0.000001779341,0.0002928131,0.00002786637,0.0003229059],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08159559,"threshold_uncertainty_score":0.7124064,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01164963508854579,"score_gpt":0.2417964532003404,"score_spread":0.2301468181117946,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}