{"id":"W4281622427","doi":"10.1128/mra.00200-22","title":"Complete Genome Sequence of a Listeria monocytogenes Strain Isolated from Sprouts and Carrying an Antimicrobial Resistance Gene","year":2022,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Listeria monocytogenes in Food Safety","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"Listeria monocytogenes; Biology; Microbiology; Listeria; Antimicrobial; Strain (injury); Whole genome sequencing; Gene; Pathogen; Genome; Bacteria; Antibiotic resistance; Genetics; Antibiotics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000362456,0.001599559,0.001452443,0.002366468,0.001385927,0.0009938253,0.0009690644,0.0009031851,0.004607147],"category_scores_gemma":[0.0007658412,0.0005503322,0.0009678626,0.005653645,0.0005298412,0.000373479,0.0005944836,0.001650144,0.004957352],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002131821,"about_ca_system_score_gemma":0.008501084,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.1820753,"about_ca_topic_score_gemma":0.1615932,"domain_scores_codex":[0.9995987,0.00001836707,0.0000307705,0.0001044062,0.0001783939,0.00006948492],"domain_scores_gemma":[0.9991559,0.0000956897,0.0001321474,0.00005138927,0.0003940868,0.0001708615],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002641355,0.0004016399,0.006695509,0.004029321,0.0001707741,0.002170047,0.001058389,0.00134968,0.9111992,0.000780877,0.03074171,0.03876149],"study_design_scores_gemma":[0.0007977583,0.001297182,0.3250312,0.00111323,0.001492293,0.004736016,0.001666453,0.002516783,0.1608494,0.001207561,0.4987544,0.0005376495],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.1511799,0.01000326,0.01596528,0.001096734,0.0005568277,0.0006001499,0.8065118,0.001690871,0.01239526],"genre_scores_gemma":[0.05619022,0.004137487,0.01533711,0.0002600119,0.00006968476,0.0001940216,0.9148865,0.0004077185,0.008517323],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.1820753,"threshold_uncertainty_score":0.362031,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06602172510601499,"score_gpt":0.2911224441577662,"score_spread":0.2251007190517512,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}