{"id":"W4281623880","doi":"10.3389/fgene.2022.844653","title":"Genome-Wide Selection Signatures and Human-Mediated Introgression Events in Bos taurus indicus-influenced Composite Beef Cattle","year":2022,"lang":"en","type":"article","venue":"Frontiers in Genetics","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"Dalhousie University; Compute Canada","keywords":"Introgression; Biology; Haplotype; Population; Selection (genetic algorithm); Single-nucleotide polymorphism; Hybrid; Genetics; Genome; Beef cattle; Evolutionary biology; Genotype; Gene; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001825233,0.0001965631,0.0002014724,0.0001902879,0.0001839037,0.0000109208,0.0002564973,0.0001731732,0.00002453642],"category_scores_gemma":[0.00002725423,0.0002217018,0.00003594049,0.0002513929,0.00009298896,0.000003583152,0.0002527231,0.0003319558,9.314635e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007343372,"about_ca_system_score_gemma":0.0000692152,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002969027,"about_ca_topic_score_gemma":0.00005066426,"domain_scores_codex":[0.9985239,0.0001937279,0.0003044666,0.0004385887,0.0002076275,0.0003317095],"domain_scores_gemma":[0.9995614,0.00001372036,0.0001123754,0.0001997257,0.00002786054,0.00008490484],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001309785,0.0001910904,0.8774599,0.0000182351,0.00003491938,0.000001827669,0.0003521222,0.02897605,0.09091316,0.00001613301,0.0007530702,0.001152446],"study_design_scores_gemma":[0.001190683,0.000637068,0.9868311,0.00001135462,0.00001538109,0.000005793474,0.0002495114,0.000142942,0.005516092,0.001020156,0.004103253,0.000276699],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9921604,0.00522937,0.001628511,0.00004744444,0.0003937946,0.0003956377,0.0000318543,0.00001177512,0.0001011856],"genre_scores_gemma":[0.9853823,0.0001372558,0.01367707,0.000191922,0.00008407691,0.00008099787,0.0002856214,0.00002943674,0.0001313222],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1093711,"threshold_uncertainty_score":0.9040737,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004244652894362625,"score_gpt":0.2236957419560577,"score_spread":0.219451089061695,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}