{"id":"W4281623880","doi":"10.3389/fgene.2022.844653","title":"Genome-Wide Selection Signatures and Human-Mediated Introgression Events in Bos taurus indicus-influenced Composite Beef Cattle","year":2022,"lang":"en","type":"article","venue":"Frontiers in Genetics","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"Dalhousie University; Compute Canada","keywords":"Introgression; Biology; Haplotype; Population; Selection (genetic algorithm); Single-nucleotide polymorphism; Hybrid; Genetics; Genome; Beef cattle; Evolutionary biology; Genotype; Gene; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003775981,0.0002085478,0.0002631169,0.001157856,0.0002639417,0.0003289858,0.0001779649,0.0001822894,0.0007921517],"category_scores_gemma":[0.0003851802,0.0001125648,0.0002430092,0.0009327151,0.0003250433,0.00009995376,0.000203537,0.0001833257,0.00007270429],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002061884,"about_ca_system_score_gemma":0.00009566235,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003182276,"about_ca_topic_score_gemma":0.004953981,"domain_scores_codex":[0.9997134,0.00007036584,0.00001713192,0.0001175477,0.00003834561,0.00004318864],"domain_scores_gemma":[0.9997857,0.00005014615,0.00007718026,0.000020483,0.00002386655,0.00004253633],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001569335,0.0000904451,0.8918397,0.00003829994,0.0003904839,0.0005866739,0.001607529,0.0003870658,0.09009115,0.0001587897,0.00009261043,0.01314787],"study_design_scores_gemma":[0.000004200077,0.00004862429,0.998997,0.000001827226,0.00003041171,0.0001149274,0.0001338489,0.000239598,0.0003303102,0.00001392388,0.00008311615,0.000002216606],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9998087,0.00003433562,0.00006693213,0.000002955491,6.362962e-7,0.000001089323,0.00003248771,0.00000138123,0.00005153887],"genre_scores_gemma":[0.9996597,0.00002613578,0.0001300898,0.00000513075,0.000002314622,0.000002109627,0.000115803,0.00000166677,0.00005725384],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003182276,"threshold_uncertainty_score":0.00632745,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004244652894362625,"score_gpt":0.2236957419560577,"score_spread":0.219451089061695,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}