{"id":"W4281644116","doi":"10.1002/pld3.408","title":"Reference nodule transcriptomes for <scp> <i>Melilotus officinalis</i> </scp> and <scp> <i>Medicago sativa</i> </scp> cv. Algonquin","year":2022,"lang":"en","type":"article","venue":"Plant Direct","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada; Compute Canada","keywords":"Biology; Rhizobia; Symbiosis; Botany; Transcriptome; Sinorhizobium meliloti; Medicago sativa; Medicago; Officinalis; Biochemistry; Genetics; Gene; Bacteria; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007472918,0.0004041366,0.0005521877,0.00005088234,0.000883174,0.000124,0.0006325405,0.0001464392,0.0001116929],"category_scores_gemma":[0.0004769751,0.000199847,0.0001908834,0.0005370369,0.0001545626,0.0001696641,0.0001964419,0.000371703,0.00003003972],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006932235,"about_ca_system_score_gemma":0.00003431232,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006496036,"about_ca_topic_score_gemma":0.0002974052,"domain_scores_codex":[0.9969264,0.0002705591,0.0004476814,0.0008454442,0.000644544,0.0008654012],"domain_scores_gemma":[0.9965533,0.002705441,0.0002126127,0.0001541102,0.00007746084,0.0002970462],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00003354503,0.0003159697,0.006707259,0.00006843243,0.0001272148,0.00004062593,0.001480242,0.000001750175,0.8113706,0.0003675207,0.1718058,0.007681075],"study_design_scores_gemma":[0.0009737395,0.001236959,0.02139886,0.0000627667,0.0001662456,0.0001949931,0.002730204,0.00009979658,0.1356674,0.0005290755,0.8367137,0.0002262266],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9859288,0.002252962,0.000003324843,0.0007004997,0.0004324491,0.0006629917,0.003763257,0.0003343395,0.005921394],"genre_scores_gemma":[0.9938743,0.0001870632,0.0002362771,0.001581218,0.0003187683,0.0003241302,0.001114201,0.000009601929,0.002354483],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6757031,"threshold_uncertainty_score":0.8149524,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02159728485913288,"score_gpt":0.2121491024666433,"score_spread":0.1905518176075104,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}