{"id":"W4281658583","doi":"10.7554/elife.70780","title":"The LOTUS initiative for open knowledge management in natural products research","year":2022,"lang":"en","type":"article","venue":"eLife","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":411,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ontario Institute for Cancer Research","funders":"National Center for Complementary and Integrative Health; Deutsche Forschungsgemeinschaft; Alfred P. Sloan Foundation; Ministerstvo Školství, Mládeže a Tělovýchovy; Office of Dietary Supplements; Instituto de Desenvolvimento Sustentável Mamirauá; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Institutes of Health; National Science Foundation","keywords":"Interoperability; Data curation; Computer science; Data science; World Wide Web; Data sharing; Knowledge base; Knowledge management; Linked data; Data management; Semantic Web; Database","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002378649,0.00008267375,0.0001486184,0.0001181456,0.0006040679,0.00005827942,0.0004453491,0.00001871858,0.0000474014],"category_scores_gemma":[0.0006397148,0.00005105911,0.00003172092,0.0006564308,0.0000745408,0.00005742615,0.0009455603,0.0004500322,0.00002883363],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002050068,"about_ca_system_score_gemma":0.0001385721,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002773925,"about_ca_topic_score_gemma":0.0000558508,"domain_scores_codex":[0.9986246,0.0002202187,0.0001819709,0.0003361581,0.000295658,0.0003413863],"domain_scores_gemma":[0.9991235,0.0002305584,0.00003547108,0.0003150767,0.0002612493,0.00003418303],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.002638574,0.0006279022,0.0001468798,0.0002421531,0.0001807179,0.00006323479,0.001972188,0.000001279759,0.01503659,0.01206311,0.8674535,0.09957384],"study_design_scores_gemma":[0.00112082,0.0002583818,0.002668339,0.00003695081,0.00001628993,0.000009797895,0.001979046,0.00003827308,0.03485251,0.0002038798,0.9587198,0.0000959405],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5724568,0.04071825,0.0000023988,0.2428411,0.004451851,0.02752199,0.0001318613,0.0001323046,0.1117434],"genre_scores_gemma":[0.9733528,0.0001758858,0.000411601,0.0007283543,0.0003055399,0.0001300606,0.00002532634,0.00001598513,0.02485439],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.400896,"threshold_uncertainty_score":0.4646063,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1288939701980928,"score_gpt":0.407680399540628,"score_spread":0.2787864293425353,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}