{"id":"W4281668353","doi":"10.1093/gbe/evac086","title":"Genetic Drift and Host-Adaptive Features Likely Underlie the Cladogenesis of Insect-Associated Lachnospiraceae","year":2022,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Lachnospiraceae; Cladogenesis; Genetics; Insect; Genome; Gene; Evolutionary biology; Phylogenetic tree; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002012133,0.0001334298,0.0001570732,0.00003366289,0.000482255,0.000005365512,0.0001259179,0.0001213062,0.000006738549],"category_scores_gemma":[0.00002921104,0.0001087572,0.0000494353,0.00008972206,0.000285261,6.579451e-7,0.0003334064,0.0000993973,5.091792e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002307214,"about_ca_system_score_gemma":0.00004893582,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001308883,"about_ca_topic_score_gemma":0.0001263707,"domain_scores_codex":[0.9991216,0.0001740244,0.0001590205,0.0002936325,0.00005334281,0.0001984023],"domain_scores_gemma":[0.9995986,0.00002690789,0.0001192668,0.0001696691,0.00005131207,0.00003425038],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001748803,0.00005808964,0.2036467,0.000008951068,0.0002695101,7.299277e-7,0.0003152391,0.0001366682,0.792824,0.001377033,0.0001759713,0.001012221],"study_design_scores_gemma":[0.0003708833,0.0008952019,0.9923096,0.000001240452,0.00005098922,0.00001987879,0.0003930642,0.00002370863,0.001063557,0.001076245,0.00365322,0.0001424591],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9628252,0.03626311,0.0001480859,0.0002130405,0.0001155128,0.0001883065,0.0001221467,0.000003675141,0.0001209205],"genre_scores_gemma":[0.9981632,0.001282624,0.0001176034,0.0001690956,0.000069245,0.00004171954,0.000031055,0.00001065798,0.0001148483],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7917605,"threshold_uncertainty_score":0.4434988,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0108377767370585,"score_gpt":0.2092803799811681,"score_spread":0.1984426032441096,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}