{"id":"W4281714350","doi":"10.1101/2022.06.04.494703","title":"Population genomics of an emergent tri-species hybrid zone","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Society of Canadian Ornithologists","keywords":"Hybrid zone; Introgression; Biology; Assortative mating; Hybrid; Sympatric speciation; Gene flow; Evolutionary biology; Reproductive isolation; Incipient speciation; Population genomics; Context (archaeology); Population; Ecology; Zoology; Genomics; Genome; Mating; Genetics; Genetic variation; Gene; Paleontology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002355543,0.0001173422,0.0001935809,0.0007948452,0.0004071095,0.0003898439,0.0002353756,0.0003005221,0.0009453028],"category_scores_gemma":[0.0002131971,0.000126541,0.0002302699,0.0004775319,0.0002755349,0.0001033943,0.0004325791,0.0004811918,0.0001263635],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007634167,"about_ca_system_score_gemma":0.000238041,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009616517,"about_ca_topic_score_gemma":0.0250114,"domain_scores_codex":[0.999832,0.00001519179,0.000006457188,0.00008123832,0.00003483204,0.00003024725],"domain_scores_gemma":[0.999751,0.00005686589,0.00005378551,0.00002524215,0.00005342245,0.00005966626],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000229944,0.00006851035,0.06399681,0.00005658903,0.00009317878,0.0003076186,0.00103571,0.000681683,0.9222701,0.000805728,0.0001902577,0.01026391],"study_design_scores_gemma":[0.00001470128,0.0001181655,0.9851809,0.00001161047,0.00003963655,0.0005247587,0.0006869643,0.002321989,0.008228126,0.0004591114,0.00239643,0.00001777327],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974681,0.00006501675,0.001320023,0.00002017797,0.000001969761,0.00001108358,0.0002474319,0.00002339753,0.0008427987],"genre_scores_gemma":[0.9972528,0.00003634851,0.001437872,0.0000471098,0.000001871556,0.0000118669,0.0006325785,0.00001319371,0.0005663069],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009616517,"threshold_uncertainty_score":0.01912111,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01421521387852067,"score_gpt":0.2164435702414438,"score_spread":0.2022283563629231,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}