{"id":"W4281885950","doi":"10.3389/frwa.2022.891477","title":"Transcriptomic Adaptation of Legionella pneumophila to Transient Heat Shock","year":2022,"lang":"en","type":"article","venue":"Frontiers in Water","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Legionella pneumophila; Heat shock protein; Transcriptome; Heat shock; Microbiology; HSP60; Shock (circulatory); Adaptation (eye); Gene; Genetics; Cell biology; Bacteria; Hsp70; Gene expression; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001828586,0.00009191453,0.0001316978,0.0001347612,0.00006712942,0.0000062682,0.0001942791,0.00004576808,0.00001814259],"category_scores_gemma":[0.000002883676,0.00007912151,0.00007427877,0.0001052841,0.00003749353,0.000002962724,0.00006108929,0.0001048107,0.000002973331],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003860323,"about_ca_system_score_gemma":0.00003369913,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008985779,"about_ca_topic_score_gemma":0.00002247278,"domain_scores_codex":[0.999033,0.00007678081,0.0001841964,0.0002548317,0.0001942306,0.0002569646],"domain_scores_gemma":[0.9997177,0.000001566259,0.000009727633,0.0001873807,0.00002465875,0.00005897776],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000454423,0.0001033466,0.003854193,0.00002092975,0.00002543939,0.000009522759,0.001976772,0.02369892,0.9543376,0.000006873267,0.01475452,0.0007574694],"study_design_scores_gemma":[0.001477995,0.0006998056,0.001448329,0.00001043498,0.00001359443,0.00001561015,0.002608244,0.002329315,0.7595797,0.0001136872,0.2313999,0.0003034416],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9913924,0.0003046676,0.006127889,0.001125428,0.0004704764,0.0002442276,0.00001719107,0.00000437315,0.0003133669],"genre_scores_gemma":[0.9980323,0.00004532597,0.0006255033,0.0002539353,0.00005337445,0.00005974434,0.0001094524,0.00001720763,0.0008031468],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2166454,"threshold_uncertainty_score":0.3226482,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01199467658572071,"score_gpt":0.2295986365168653,"score_spread":0.2176039599311446,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}