{"id":"W4281962669","doi":"10.1111/mec.16554","title":"Two hundred and five newly assembled mitogenomes provide mixed evidence for rivers as drivers of speciation for Amazonian primates","year":2022,"lang":"en","type":"article","venue":"Molecular Ecology","topic":"Primate Behavior and Ecology","field":"Psychology","cited_by":40,"is_retracted":false,"has_abstract":true,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"H2020 European Research Council; National Human Genome Research Institute; Agencia Estatal de Investigación; Natural Environment Research Council; Natural Sciences and Engineering Research Council of Canada; Generalitat de Catalunya; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Sight Research UK; Centres de Recerca de Catalunya; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Margot Marsh Biodiversity Foundation; Primate Conservation; European Commission; Rufford Foundation; National Institutes of Health; Canada Research Chairs; Howard Hughes Medical Institute","keywords":"Biology; Amazon rainforest; Allopatric speciation; Mitochondrial DNA; Amazonian; Ecology; Zoology; Genetic algorithm; Extant taxon; Evolutionary biology; Clade; Phylogenetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001131698,0.000487076,0.0004880234,0.002200035,0.00130978,0.001129452,0.0003956185,0.0006565696,0.002154966],"category_scores_gemma":[0.004478346,0.0004057329,0.0008350119,0.001779876,0.0006403329,0.001291697,0.001010749,0.0008382353,0.0005289423],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00038345,"about_ca_system_score_gemma":0.0004440795,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001048512,"about_ca_topic_score_gemma":0.006512607,"domain_scores_codex":[0.9992316,0.0001445882,0.0001007643,0.0002933747,0.0001368328,0.00009278009],"domain_scores_gemma":[0.9968523,0.001042223,0.001103832,0.0002803331,0.0003925264,0.0003287409],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001731978,0.0001356821,0.7100114,0.001826282,0.001815919,0.001038345,0.006629488,0.00155742,0.1850434,0.001962292,0.001661042,0.08658679],"study_design_scores_gemma":[0.00004377916,0.0001417944,0.9696304,0.0002482845,0.0007054738,0.001339667,0.001194351,0.002249444,0.00282278,0.001333177,0.02022403,0.00006683271],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.988309,0.003505845,0.002728258,0.0001758212,0.00005438698,0.00001846591,0.00316319,0.0001250487,0.001919766],"genre_scores_gemma":[0.9889337,0.0007410024,0.003605307,0.0001961905,0.00005893776,0.00003173574,0.006025645,0.00008353211,0.000324103],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002200035,"threshold_uncertainty_score":0.007209122,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03356125553022207,"score_gpt":0.3440853656194852,"score_spread":0.3105241100892631,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}