{"id":"W4282042246","doi":"10.1186/s12870-022-03626-5","title":"Comprehensive analysis of the MYB transcription factor gene family in Morus alba","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ministry of Agriculture","funders":"Ministry of Agriculture and Rural Affairs of the People's Republic of China; Natural Science Foundation of Jiangsu Province; Government of Jiangsu Province","keywords":"Biology; MYB; Genetics; Gene; Transcription factor; Intron; Structural motif; Exon; WRKY protein domain; Synteny; Genome; Transcriptome; Computational biology; Gene expression; Biochemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001124149,0.0001367055,0.000326319,0.0002449015,0.00008214905,0.000003484228,0.0003837727,0.0001112594,0.00008710309],"category_scores_gemma":[0.00002131533,0.0001037175,0.0002828243,0.0005588441,0.00007179556,0.00000149441,0.0001977615,0.0001240698,0.000001640745],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002258669,"about_ca_system_score_gemma":0.00006509606,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002853076,"about_ca_topic_score_gemma":0.0004794903,"domain_scores_codex":[0.998552,0.0004541717,0.0003111006,0.0003554586,0.0001195911,0.0002077231],"domain_scores_gemma":[0.9993641,0.00003950665,0.0001560027,0.0003745399,0.00003086752,0.00003497016],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001465443,0.00005816235,0.04788603,0.000003805561,0.0003604588,0.000001873664,0.00005263615,0.005624229,0.9446876,0.00002223968,0.00107684,0.00007957705],"study_design_scores_gemma":[0.001088092,0.0002561237,0.2694773,0.000004769518,0.0005334017,0.00002771798,0.0004974445,0.004870628,0.6442781,0.00003411228,0.07853777,0.0003944972],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957684,0.000566156,0.0004334482,0.00004351697,0.0001716325,0.0001327652,0.002751144,0.000005843551,0.0001271201],"genre_scores_gemma":[0.9968005,0.0001532928,0.0001453269,0.0003448899,0.00002431053,0.00003112845,0.002280556,0.000007477384,0.0002125322],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3004095,"threshold_uncertainty_score":0.4229477,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02803663141334747,"score_gpt":0.2541175073385542,"score_spread":0.2260808759252067,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}