{"id":"W4282836135","doi":"10.3390/pathogens11060661","title":"Surveillance of Amoebic Keratitis-Causing Acanthamoebae for Potential Bacterial Endosymbionts in Ontario, Canada","year":2022,"lang":"en","type":"article","venue":"Pathogens","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Toronto General Hospital; University of Toronto; Public Health Ontario; University of Ottawa; Western University","funders":"Public Health Ontario; University of Toronto","keywords":"Acanthamoeba; Biology; Microbiology; Acanthamoeba keratitis; Rickettsiales; Polymerase chain reaction; Keratitis; Virology; Bacteria; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002544375,0.0001147701,0.000176442,0.00004615295,0.0001467571,0.00001178296,0.0001516813,0.00005075145,0.0002779131],"category_scores_gemma":[0.00004312005,0.0001274763,0.00007298516,0.00008685106,0.00003692569,0.000002820973,0.0001829428,0.0001264662,2.313922e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001612017,"about_ca_system_score_gemma":0.001428585,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.7199325,"about_ca_topic_score_gemma":0.9741506,"domain_scores_codex":[0.9987935,0.000108015,0.000238339,0.0003023808,0.00022548,0.0003322706],"domain_scores_gemma":[0.9995583,0.00001944511,0.00007896205,0.0002132921,0.0000683877,0.00006161581],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002342345,0.00005486401,0.03631057,0.00001480514,0.00002382124,0.00004664696,0.00004701022,0.0002967631,0.9604457,0.00001757718,0.002180205,0.00032783],"study_design_scores_gemma":[0.006225702,0.001105309,0.2751224,0.00002646504,0.00002978335,0.0002003207,0.0005158292,0.0005914534,0.5447083,0.00009478649,0.170378,0.001001599],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980135,0.000119344,0.0001388482,0.00009753013,0.000526524,0.0002962867,0.0005644303,0.000002760113,0.0002407998],"genre_scores_gemma":[0.9983367,0.00002011703,0.0001699348,0.00007076268,0.0001422559,0.00007426301,0.0005953592,0.0000186263,0.0005719787],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4157374,"threshold_uncertainty_score":0.5198332,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01130640970288727,"score_gpt":0.2273294027487148,"score_spread":0.2160229930458276,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}