{"id":"W4283011420","doi":"10.1038/s41396-022-01261-4","title":"Endosymbiont population genomics sheds light on transmission mode, partner specificity, and stability of the scaly-foot snail holobiont","year":2022,"lang":"en","type":"article","venue":"The ISME Journal","topic":"Parasite Biology and Host Interactions","field":"Environmental Science","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"Japan Agency for Marine-Earth Science and Technology; Japan Society for the Promotion of Science; Ministry of Education, Culture, Sports, Science and Technology; Hong Kong University of Science and Technology; China Ocean Mineral Resources Research and Development Association; National Natural Science Foundation of China; Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)","keywords":"Biology; Holobiont; Snail; Transmission (telecommunications); Population genomics; Population; Genomics; Evolutionary biology; Ecology; Genetics; Genome; Gene; Bacteria; Symbiosis; Environmental health","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001711921,0.0001708472,0.0001635049,0.0005095255,0.0002053135,0.0003048277,0.0001514404,0.0001837511,0.0004533888],"category_scores_gemma":[0.0003001736,0.0001186178,0.0001729333,0.0003294651,0.0003132382,0.0003118169,0.0003997691,0.000214122,0.00007532661],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002295227,"about_ca_system_score_gemma":0.000134905,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001528694,"about_ca_topic_score_gemma":0.002619259,"domain_scores_codex":[0.9998946,0.00001293285,0.000006410682,0.00004888811,0.00001437622,0.00002270483],"domain_scores_gemma":[0.9997923,0.00003974047,0.00008403684,0.00001757177,0.00003684686,0.00002958236],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001523981,0.00002368996,0.1882522,0.00005804703,0.00004194558,0.00009930662,0.0007559437,0.000288186,0.8034906,0.0001872091,0.00001854835,0.006631867],"study_design_scores_gemma":[0.000002497647,0.00009863566,0.9884661,0.000004736137,0.0000242846,0.0001425889,0.0005572668,0.0007112965,0.009587058,0.00009921861,0.0003005911,0.000005734728],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994286,0.00004880431,0.0003677736,0.000004935528,4.147047e-7,9.932152e-7,0.00003695132,0.000002577005,0.0001090252],"genre_scores_gemma":[0.9995844,0.00003063943,0.0002201497,0.000006371125,8.344569e-7,0.000001666802,0.00007947082,0.000001753463,0.00007482243],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001528694,"threshold_uncertainty_score":0.003039539,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02051510236697679,"score_gpt":0.2904453464713243,"score_spread":0.2699302441043475,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}