{"id":"W4283032787","doi":"10.1093/ve/veac056","title":"A new perspective on the evolution and diversity of the genus <i>Amdoparvovirus</i> (family <i>Parvoviridae</i>) through genetic characterization, structural homology modeling, and phylogenetics","year":2022,"lang":"en","type":"article","venue":"Virus Evolution","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"Memorial University of Newfoundland","funders":"National Institute of General Medical Sciences; National Institutes of Health","keywords":"Biology; Phylogenetic tree; Phylogenetics; Mink; Virus classification; Genetics; Evolutionary biology; Viral evolution; Genome; Gene; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004840647,0.0004617845,0.0003989717,0.0009822049,0.0005859425,0.001579419,0.0005445713,0.0006116711,0.001586476],"category_scores_gemma":[0.0004158572,0.0001708286,0.0003237357,0.000679598,0.0007815649,0.002579638,0.000512643,0.0009081651,0.0001985025],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008496694,"about_ca_system_score_gemma":0.0006393136,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003974461,"about_ca_topic_score_gemma":0.005434683,"domain_scores_codex":[0.9998792,0.00002764038,0.000007560821,0.00004131808,0.00002415732,0.00002012369],"domain_scores_gemma":[0.9997651,0.00007828125,0.00005604938,0.00002543311,0.00003831451,0.00003690923],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0004133747,0.0001563392,0.1252779,0.001605767,0.0002961183,0.002750053,0.00575785,0.01884617,0.4746691,0.06935697,0.005501254,0.2953691],"study_design_scores_gemma":[0.00005336549,0.001166868,0.3146742,0.001547704,0.0005029436,0.005247947,0.01720717,0.09363502,0.05430349,0.1183558,0.3930069,0.0002986437],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8205355,0.08339111,0.06784418,0.006149131,0.0003238829,0.00003698675,0.0005321046,0.0004672468,0.02071985],"genre_scores_gemma":[0.9345683,0.02950818,0.03259755,0.0005087907,0.0001999856,0.00001654034,0.000608733,0.00005692886,0.001934933],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003974461,"threshold_uncertainty_score":0.007902682,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01497485737169435,"score_gpt":0.2464767722996399,"score_spread":0.2315019149279455,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}