{"id":"W4283073921","doi":"10.3390/jof8060637","title":"Comparative Analysis of Transcriptomes of Ophiostoma novo-ulmi ssp. americana Colonizing Resistant or Sensitive Genotypes of American Elm","year":2022,"lang":"en","type":"article","venue":"Journal of Fungi","topic":"Forest Insect Ecology and Management","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; University of Victoria; Université Laval","funders":"Genome Canada","keywords":"Biology; Dutch elm disease; Gene; Transcriptome; Genetics; Ophiostoma; Virulence; Ceratocystis; Mutant; RNA-Seq; Gene expression profiling; Gene expression; Fungus; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006763912,0.0001835266,0.0002570787,0.000338217,0.000160712,0.0002632652,0.0001114417,0.0001438899,0.0003718743],"category_scores_gemma":[0.0001327326,0.000107883,0.000251419,0.0003701157,0.0001284274,0.0001957977,0.0002369053,0.0002543278,0.0001294662],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001915701,"about_ca_system_score_gemma":0.0001701426,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001280338,"about_ca_topic_score_gemma":0.001619194,"domain_scores_codex":[0.9999417,0.000004832789,0.000002811981,0.00002403281,0.00001182814,0.0000147414],"domain_scores_gemma":[0.9999124,0.00001943362,0.00002306768,0.000006509044,0.00001607395,0.00002240342],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000133611,0.000009733696,0.002643429,0.00002921637,0.000007849925,0.00003450296,0.00005366415,0.00008949224,0.9958461,0.00002354541,0.00001681505,0.001112181],"study_design_scores_gemma":[0.00001484614,0.0003474513,0.8567355,0.00001564447,0.0000875573,0.0004832683,0.0006123685,0.004330784,0.1346488,0.0001663388,0.002538226,0.00001916505],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979745,0.0001759401,0.0004859531,0.00001299899,0.000001998889,0.00000578934,0.001019535,0.0000172084,0.0003060795],"genre_scores_gemma":[0.9906626,0.0002617264,0.001707794,0.00004468499,0.000004342724,0.00003816176,0.005985309,0.00002029655,0.001274951],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001280338,"threshold_uncertainty_score":0.002545834,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0155249470142013,"score_gpt":0.2606831804430332,"score_spread":0.2451582334288319,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}