{"id":"W4283276373","doi":"10.21203/rs.3.rs-1699690/v1","title":"New Vista into Origins of Viruses from a Prototypic ssDNA Phage","year":2022,"lang":"en","type":"preprint","venue":"Research Square","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université Laval","funders":"Helsinki Institute of Life Science, Helsingin Yliopisto; Emil Aaltosen Säätiö; China Scholarship Council; Academy of Finland; Biocenter Finland; Helsingin Yliopisto","keywords":"Biology; Genetics; Virology; Computational biology; Evolutionary biology; Genealogy; History","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005792467,0.0007423048,0.0006531009,0.0009541906,0.0008834768,0.002688502,0.000694647,0.001653697,0.006504183],"category_scores_gemma":[0.001240174,0.000714952,0.0006843526,0.0005444732,0.001562716,0.005731706,0.001515967,0.002568509,0.001231897],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004845647,"about_ca_system_score_gemma":0.0002742629,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001635327,"about_ca_topic_score_gemma":0.0002318553,"domain_scores_codex":[0.9996394,0.0000486771,0.00002233423,0.0001502713,0.0000863958,0.00005297204],"domain_scores_gemma":[0.9988118,0.0007220437,0.00007141862,0.000217625,0.0000750293,0.0001020678],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.002145699,0.0001998308,0.003547062,0.0009595018,0.00006290578,0.00107577,0.001795944,0.001725486,0.8322639,0.08666158,0.00192905,0.06763332],"study_design_scores_gemma":[0.0001335695,0.0009148815,0.01007008,0.0002921881,0.0001608257,0.003457346,0.001406499,0.008375444,0.5880032,0.2584024,0.1285979,0.0001856403],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7512745,0.03783293,0.1318162,0.003555955,0.001449437,0.00009988711,0.001104373,0.001466691,0.07140003],"genre_scores_gemma":[0.8963898,0.02176763,0.05291785,0.001129062,0.001256694,0.0001034433,0.001641017,0.0007860567,0.02400853],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006504183,"threshold_uncertainty_score":0.02175862,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05730834475257191,"score_gpt":0.4018618763881517,"score_spread":0.3445535316355798,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}