{"id":"W4283321613","doi":"10.17504/protocols.io.ewov18e4ygr2/v2","title":"nCoV-2019 McGill Artic PCR Protocol, V4.1 at 63C v2","year":2022,"lang":"en","type":"preprint","venue":"","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Protocol (science); Virology; Geography; Computational biology; Biology; Medicine; Infectious disease (medical specialty); Outbreak; Pathology","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0004158956,0.0003795158,0.0005680703,0.0002517773,0.000266082,0.00003083384,0.0002076354,0.0002679068,0.005980208],"category_scores_gemma":[0.0004632348,0.0003333266,0.000294478,0.0002568516,0.00005251448,0.00003905249,0.001359911,0.001218046,0.000935951],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000626098,"about_ca_system_score_gemma":0.0001900959,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004088741,"about_ca_topic_score_gemma":0.00006956987,"domain_scores_codex":[0.9975392,0.0001031259,0.0005820635,0.0007886781,0.000573876,0.0004131126],"domain_scores_gemma":[0.9983944,0.0001405028,0.0002640263,0.0009509963,0.0001294471,0.0001205908],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.003465286,0.003043114,0.03943701,0.009254747,0.001655524,0.002210192,0.0009558208,0.0003305227,0.6916224,0.00239357,0.181956,0.06367577],"study_design_scores_gemma":[0.002375657,0.0004072372,0.001409914,0.0002785786,0.0001478034,0.0003411901,0.00006162635,0.001474215,0.2268073,0.0007211332,0.7654494,0.0005259292],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"other","genre_gemma":"protocol","genre_scores_codex":[0.342573,0.00004992207,0.0002761745,0.001391092,0.002126742,0.1670671,0.00007703283,0.002501717,0.4839372],"genre_scores_gemma":[0.2668807,0.000007175579,0.01137242,0.02956904,0.001853377,0.5566785,0.0001910721,0.0005359352,0.1329118],"genre_candidate":"protocol","genre_consensus":null,"teacher_disagreement_score":0.5834934,"threshold_uncertainty_score":0.9999119,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0753679664780027,"score_gpt":0.3555215642148852,"score_spread":0.2801535977368825,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}