{"id":"W4283573956","doi":"10.1128/aem.01421-21","title":"A Newly Identified Group of P-like (PL) Fimbria Genes from Extraintestinal Pathogenic Escherichia coli (ExPEC) Encode Distinct Adhesin Subunits and Mediate Adherence to Host Cells","year":2022,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds de recherche du Québec; Fonds de recherche du Québec – Nature et technologies; Université Paris-Est Créteil Val-de-Marne; Government of Canada; University of Minnesota","keywords":"Fimbria; Bacterial adhesin; Biology; Escherichia coli; Plasmid; Pilus; Gene; Microbiology; Genetics; Enterobacteriaceae; Host (biology)","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001412194,0.0002320809,0.0002737253,0.00003700693,0.0001932277,0.00001478623,0.0002124505,0.00008345053,0.0001430548],"category_scores_gemma":[0.00001114202,0.0002349556,0.00004497998,0.00005315612,0.0003872039,0.000003593902,0.001099933,0.0001268012,0.000008567633],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002856874,"about_ca_system_score_gemma":0.00002136147,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001341656,"about_ca_topic_score_gemma":0.0001117274,"domain_scores_codex":[0.99862,0.0001188869,0.0002632155,0.0005895172,0.0000706597,0.0003377459],"domain_scores_gemma":[0.9994885,0.0000499569,0.0001091628,0.0002274314,0.000005351013,0.0001196147],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002885745,0.00009292032,0.004300099,0.00001342428,0.00007199743,0.000007570472,0.0002574791,0.000003661203,0.993338,0.00000583263,0.0002210329,0.001399429],"study_design_scores_gemma":[0.001818857,0.001524747,0.1115956,0.00001039744,0.000059043,0.00004691969,0.00178916,0.0000118932,0.8720128,0.00004418618,0.01055661,0.0005298426],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961683,0.001619525,0.00009509025,0.00003011861,0.0001151582,0.0003732694,0.001557167,0.000007385577,0.00003396934],"genre_scores_gemma":[0.9969427,0.0005405601,0.0009396455,0.0001725051,0.00006287285,0.0001467516,0.001054821,0.00002386027,0.0001162788],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1213252,"threshold_uncertainty_score":0.9581212,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008727728099087437,"score_gpt":0.2033273005566806,"score_spread":0.1945995724575931,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}