{"id":"W4283707456","doi":"10.1128/mra.00296-22","title":"Complete Genome Sequence of a Listeria monocytogenes Strain from a Sample of Kale Salad","year":2022,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Identification and Quantification in Food","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Food Inspection Agency","funders":"","keywords":"Listeria monocytogenes; Strain (injury); Biology; Whole genome sequencing; Listeria; Microbiology; Pathogen; Foodborne pathogen; Genome; Opportunistic pathogen; Bacteria; Food science; Gene; Genetics; Pseudomonas aeruginosa","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002386024,0.0001242967,0.0002054243,0.00006701043,0.0001351061,0.000007380367,0.000439156,0.00007192005,0.0003679376],"category_scores_gemma":[0.00003488187,0.0001391134,0.00008613832,0.0001271813,0.0002236545,0.000002528091,0.000275374,0.00006990768,0.000008476133],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002222557,"about_ca_system_score_gemma":0.00005281777,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009954433,"about_ca_topic_score_gemma":0.00001230709,"domain_scores_codex":[0.998728,0.0002045138,0.0004385622,0.0003691502,0.00007938493,0.0001804048],"domain_scores_gemma":[0.9990093,0.00002271118,0.0003510847,0.0004879109,0.00009829639,0.00003068639],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001224084,0.0001136015,0.002653617,0.000013602,0.0001028944,3.844504e-7,0.0002399776,0.0001121674,0.9954552,0.00004902451,0.0009991673,0.0001379307],"study_design_scores_gemma":[0.000550812,0.0002761373,0.001029555,0.000005017067,0.00001741735,0.00001012063,0.000607802,0.00001401253,0.1088416,0.00002924312,0.8884671,0.0001511779],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9259875,0.0005849233,0.0006799843,0.00009098725,0.0001516398,0.0002250958,0.07214869,0.000008328607,0.0001228847],"genre_scores_gemma":[0.9341354,0.00003033679,0.0009098065,0.0002576899,0.00004097803,0.00005663947,0.06372795,0.00001688445,0.0008242961],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8874679,"threshold_uncertainty_score":0.5672881,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05392702427085127,"score_gpt":0.2792487006268393,"score_spread":0.225321676355988,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}