{"id":"W4283711290","doi":"10.1017/s0950268822001030","title":"Carbapenem-resistant <i>Escherichia coli</i> from shrimp and salmon available for purchase by consumers in Canada: a risk profile using the Codex framework","year":2022,"lang":"en","type":"article","venue":"Epidemiology and Infection","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health Canada; Public Health Agency of Canada","funders":"University of Cambridge","keywords":"Shrimp; Carbapenem; Antibiotic resistance; Antimicrobial; Biology; Aquaculture; Escherichia coli; Multiple drug resistance; Biotechnology; Microbiology; Drug resistance; Fishery; Fish <Actinopterygii>; Antibiotics; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008673609,0.0001354498,0.0002513712,0.00001713053,0.0003868134,0.000007327977,0.00006687245,0.0001315093,0.00006336843],"category_scores_gemma":[0.0007200306,0.0001172081,0.00003159668,0.00006951208,0.0001517945,0.000005313052,0.00009137861,0.0002546984,3.362523e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001112338,"about_ca_system_score_gemma":0.0002691143,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.5149141,"about_ca_topic_score_gemma":0.189189,"domain_scores_codex":[0.9984267,0.000597776,0.0002912803,0.0003763758,0.00004295243,0.0002648821],"domain_scores_gemma":[0.9991055,0.0004214909,0.0002116978,0.000187215,0.00002180219,0.0000523388],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006030936,0.00002929453,0.8505688,0.00001987848,0.00007677622,0.000001324423,0.00003738873,0.0002154258,0.1367579,0.00008527806,0.01115922,0.0004456077],"study_design_scores_gemma":[0.003140523,0.001221426,0.6089686,0.00007502281,0.0002930874,0.00003578212,0.0009786403,0.01854039,0.02499296,0.00331219,0.3373615,0.001079901],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9913671,0.004048324,0.003213503,0.0002166803,0.0002910036,0.0003979055,0.0004046685,0.000005188143,0.00005560938],"genre_scores_gemma":[0.9962536,0.001164892,0.001253777,0.0009150654,0.00005489106,0.00007678373,0.0001902406,0.00001525671,0.00007551427],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3262023,"threshold_uncertainty_score":0.8256061,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01774517439241664,"score_gpt":0.2604962404212859,"score_spread":0.2427510660288693,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}