{"id":"W4283749923","doi":"10.1016/j.intimp.2022.109013","title":"Immunogenicity of loop 3 of Omp34 from A. Baumannii in loopless C-lobe of TbpB of N. meningitidis","year":2022,"lang":"en","type":"article","venue":"International Immunopharmacology","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Immunogenicity; Acinetobacter baumannii; Meningococcal vaccine; Antigen; Immunization; Neisseria meningitidis; Bacterial outer membrane; Microbiology; Biology; Immunity; Virology; Immunology; Immune system; Bacteria; Gene; Pseudomonas aeruginosa; Escherichia coli; Biochemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002364632,0.0001147419,0.0003360457,0.0001261395,0.00001795135,0.000001597879,0.0006593887,0.0000771034,0.001026684],"category_scores_gemma":[0.0000495469,0.0001322152,0.0001324273,0.0001159143,0.0002443885,0.000006291426,0.0004833702,0.0001168166,8.135803e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003844566,"about_ca_system_score_gemma":0.0001125234,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005484769,"about_ca_topic_score_gemma":0.0000199847,"domain_scores_codex":[0.9985442,0.0001451375,0.0007426456,0.0002172317,0.0002195643,0.0001312658],"domain_scores_gemma":[0.9988552,0.00006385452,0.0006161279,0.0002332741,0.0002159799,0.00001552491],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001465284,0.0003816811,0.0352714,0.00002789637,0.0004397676,0.000004695612,0.0001303781,0.000467189,0.9611679,0.0001728212,0.0001886601,0.0002823432],"study_design_scores_gemma":[0.001579228,0.000256037,0.06527123,0.00002076846,0.00003441195,0.000005162248,0.0002186282,0.00009139296,0.9313795,0.0001204874,0.0009296777,0.00009350658],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964339,0.001510295,0.00009045881,0.00004532512,0.0006600431,0.0001310165,0.0006263165,0.000002123328,0.0005005129],"genre_scores_gemma":[0.9987542,0.0002301828,0.0004613487,0.00002875059,0.00003352632,0.0000112741,0.0002662027,0.00001409813,0.0002003976],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02999983,"threshold_uncertainty_score":0.9998865,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009671882837508633,"score_gpt":0.2812245430953763,"score_spread":0.2715526602578677,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}