{"id":"W4283764229","doi":"10.3389/fpls.2022.923069","title":"Taxonomically Restricted Genes Are Associated With Responses to Biotic and Abiotic Stresses in Sugarcane (Saccharum spp.)","year":2022,"lang":"en","type":"article","venue":"Frontiers in Plant Science","topic":"Sugarcane Cultivation and Processing","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Biology; Gene; Genome; Transcriptome; Saccharum; Genetics; Abiotic stress; Gene expression; Botany","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008141142,0.0004021571,0.0003428004,0.0008634893,0.0004965464,0.0003555771,0.0001442343,0.0002733125,0.001135415],"category_scores_gemma":[0.0001459213,0.0001207675,0.0003856297,0.001500236,0.0003052823,0.0002848781,0.0003985579,0.0002762032,0.0002926345],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002377797,"about_ca_system_score_gemma":0.0003311504,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002858564,"about_ca_topic_score_gemma":0.004360125,"domain_scores_codex":[0.9998647,0.000004450396,0.000008293971,0.00007140818,0.00002349484,0.00002754654],"domain_scores_gemma":[0.9998469,0.00001898428,0.00006400825,0.000009920142,0.0000306126,0.00002947266],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002691252,0.00002762718,0.03394646,0.000374839,0.00005994039,0.0003923305,0.000362132,0.0001676841,0.9494849,0.0002156898,0.0003590377,0.01434018],"study_design_scores_gemma":[0.00001459382,0.000108538,0.9362524,0.00004497168,0.0002377634,0.001020538,0.0006616363,0.0009136813,0.04916057,0.0005109159,0.0110364,0.00003791241],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9870874,0.003253181,0.002149511,0.00007431083,0.00002300846,0.00002062762,0.005911886,0.0001133412,0.00136661],"genre_scores_gemma":[0.9763514,0.00189456,0.003529507,0.0001801435,0.00002398514,0.00006045847,0.0145719,0.00005704715,0.00333099],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002858564,"threshold_uncertainty_score":0.005683899,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02208357872016264,"score_gpt":0.2094303667839617,"score_spread":0.187346788063799,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}