{"id":"W4283781593","doi":"10.1186/s13007-022-00923-w","title":"Protocol: rhPCR and SNaPshot assays to distinguish Plasmodiophora brassicae pathotype clusters","year":2022,"lang":"en","type":"article","venue":"Plant Methods","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Food Inspection Agency; University of Alberta","funders":"University of Alberta; Alberta Canola Producers Commission; Alberta Agriculture and Forestry; Results Driven Agriculture Research","keywords":"Clubroot; Biology; Canola; Brassica; Genetics; Biotechnology; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004859375,0.003865724,0.001990702,0.003669671,0.001679998,0.001363149,0.002998912,0.002995308,0.02032341],"category_scores_gemma":[0.007321323,0.00278038,0.002038452,0.001710876,0.001465433,0.001695155,0.00181171,0.003944966,0.02237514],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007226604,"about_ca_system_score_gemma":0.002307747,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005789329,"about_ca_topic_score_gemma":0.001338364,"domain_scores_codex":[0.9922621,0.002749616,0.001211881,0.001820775,0.001363427,0.0005922824],"domain_scores_gemma":[0.9942411,0.001405865,0.0007087173,0.001189725,0.00216182,0.0002927477],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000959545,0.0007264339,0.00203164,0.002168098,0.00009750894,0.0004656316,0.0005305827,0.001162101,0.9469784,0.002446889,0.0138024,0.02863066],"study_design_scores_gemma":[0.0007203664,0.003612562,0.009197561,0.0006546803,0.0003008749,0.002215079,0.0003408956,0.01280414,0.8505519,0.002792893,0.1164072,0.0004018891],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"protocol","genre_scores_codex":[0.04036851,0.002139899,0.9084729,0.0007202573,0.001180506,0.02198971,0.008826129,0.007764127,0.00853804],"genre_scores_gemma":[0.04171108,0.001877186,0.85574,0.001171421,0.0003038881,0.05013011,0.02990223,0.001263395,0.01790067],"genre_candidate":"protocol","genre_consensus":null,"teacher_disagreement_score":0.02032341,"threshold_uncertainty_score":0.06798863,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04183169750265962,"score_gpt":0.3206459925958652,"score_spread":0.2788142950932055,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}