{"id":"W4284691712","doi":"10.1186/s12915-022-01361-9","title":"Comparative genomic analysis of Babesia duncani responsible for human babesiosis","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Agricultural Science and Technology Innovation Program; Chinese Academy of Agricultural Sciences; Zhejiang University; State Key Laboratory of Veterinary Etiological Biology; Universidade de Macau; National Natural Science Foundation of China","keywords":"Biology; Babesia; Babesiosis; Clade; Phylogenetic tree; Genome; Tick; Theileria; Parasite hosting; Genetics; Virology; Gene; Parasitology; Whole genome sequencing; Zoology","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009084232,0.0001973916,0.0001994519,0.0006458705,0.0002224738,0.0002451845,0.0001329431,0.0002067167,0.001332341],"category_scores_gemma":[0.000232695,0.0001060993,0.0003047934,0.0007278364,0.0001336324,0.0001015994,0.0001979368,0.0002652518,0.0003486509],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002168408,"about_ca_system_score_gemma":0.000160937,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001285391,"about_ca_topic_score_gemma":0.001316972,"domain_scores_codex":[0.9998915,0.000009933328,0.000006568247,0.00004333489,0.00002454252,0.00002404389],"domain_scores_gemma":[0.999861,0.00002682075,0.00003951191,0.00001109729,0.00003248569,0.00002905169],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004923467,0.00004286291,0.02047263,0.0002017279,0.00004734349,0.0003322032,0.0001909792,0.000195532,0.9670312,0.0001264436,0.000238908,0.01062777],"study_design_scores_gemma":[0.00002798241,0.0005553641,0.8413782,0.00006875319,0.0002389434,0.003370084,0.0006028414,0.002362681,0.1346656,0.0002882191,0.01642074,0.00002062818],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.991217,0.001359689,0.002126026,0.00006656391,0.00001697547,0.00002408252,0.003810618,0.00003699991,0.001342049],"genre_scores_gemma":[0.9774096,0.0009578087,0.005244561,0.0001002013,0.00001815081,0.0000356953,0.01523906,0.00002579382,0.0009690215],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001332341,"threshold_uncertainty_score":0.004457116,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04311190360150002,"score_gpt":0.3161181614480373,"score_spread":0.2730062578465373,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}