{"id":"W4285006713","doi":"10.3390/antibiotics11070925","title":"Comparative Genomic Analysis Discloses Differential Distribution of Antibiotic Resistance Determinants between Worldwide Strains of the Emergent ST213 Genotype of Salmonella Typhimurium","year":2022,"lang":"en","type":"article","venue":"Antibiotics","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Universidad Michoacana de San Nicolás de Hidalgo","keywords":"Antibiotic resistance; Genotype; Biology; Salmonella enterica; Genome; Salmonella; Plasmid; Genetics; Serotype; Multiple drug resistance; Gene; Antibiotics; Microbiology; Bacteria","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002497638,0.0001624434,0.0007055935,0.00002822115,0.0001824389,0.00000536219,0.0005031021,0.00006512657,0.0001113768],"category_scores_gemma":[0.00002744471,0.00007077197,0.0003488675,0.0009432369,0.0003336508,0.00002488484,0.0002820057,0.0001349003,0.00000103874],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003344827,"about_ca_system_score_gemma":0.00001884531,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002300149,"about_ca_topic_score_gemma":0.0009092173,"domain_scores_codex":[0.9981479,0.0003826834,0.0006736699,0.0002763043,0.0002662064,0.0002532225],"domain_scores_gemma":[0.998763,0.0002062987,0.0007057424,0.0001824763,0.00009490828,0.00004752296],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00004652948,0.0001670799,0.7840348,0.00002375355,0.0002930799,6.980278e-7,0.0001500418,0.0001352126,0.214498,0.0002250603,0.00005967486,0.0003660551],"study_design_scores_gemma":[0.00009267196,0.0001651928,0.9484395,0.00001609022,0.0005223898,4.814427e-7,0.0004107277,0.00009105609,0.0498918,0.0001365246,0.0001137734,0.0001197549],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978185,0.0001948866,0.0000378011,0.000107681,0.00015744,0.0001926554,0.001425158,0.000008053536,0.00005781173],"genre_scores_gemma":[0.9993666,0.00006387606,0.00001958773,0.000008234393,0.00005480926,2.418307e-7,0.0003405163,0.000001522248,0.0001446435],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1646062,"threshold_uncertainty_score":0.2885997,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03368516730465798,"score_gpt":0.2654702040344602,"score_spread":0.2317850367298022,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}