{"id":"W4285009202","doi":"10.1128/mra.00255-22","title":"Draft Genome Sequence of <i>Helicobacter</i> sp. Strain CaF467b, Isolated from a Pig Manure Storage Tank","year":2022,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Government of Canada","keywords":"Whole genome sequencing; Strain (injury); Manure; Genome; Biology; Sequence (biology); Gene; Microbiology; Genetics; Agronomy","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002432298,0.0002873417,0.0003481264,0.00006413792,0.0002851251,0.00001299576,0.0005702802,0.0001526851,0.000199246],"category_scores_gemma":[0.00001331011,0.0003027137,0.0001343744,0.0001382069,0.0002171625,0.00000122019,0.0007538633,0.0002047231,0.00001323958],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005838514,"about_ca_system_score_gemma":0.00008388647,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001092126,"about_ca_topic_score_gemma":0.00003158699,"domain_scores_codex":[0.9981577,0.0002219458,0.0004228627,0.0006449713,0.00009558864,0.0004569627],"domain_scores_gemma":[0.9990292,0.00001645574,0.0002639011,0.000546284,0.00007768838,0.00006646854],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002148733,0.0001200145,0.005698971,0.0000104396,0.0003397609,0.00001321491,0.0004559762,0.0004151132,0.9898149,0.000004455907,0.002724801,0.0001874489],"study_design_scores_gemma":[0.001068486,0.000952068,0.001485786,0.000008150234,0.00005662864,0.00004849096,0.0007517118,0.00001557494,0.01077581,0.00003227007,0.98442,0.0003850031],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9654976,0.003103548,0.00009263138,0.0001680107,0.0002274761,0.0003180126,0.03021989,0.000007993029,0.0003648112],"genre_scores_gemma":[0.9799005,0.0001685222,0.0002238524,0.00128263,0.0001361344,0.00006156433,0.01672262,0.00003740277,0.001466795],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9816952,"threshold_uncertainty_score":0.9999425,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01209578625025356,"score_gpt":0.2200930365292382,"score_spread":0.2079972502789846,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}