{"id":"W4285150126","doi":"10.1007/978-1-0716-2449-4_2","title":"Lambda Red Recombineering in Shigella flexneri","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Shigellosis; Recombineering; Shigella flexneri; Shigella; Homologous recombination; Biology; Genetics; Diarrheal disease; Gene; Genome; Microbiology; Virology; Computational biology; Diarrhea; Medicine; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003753985,0.0004217154,0.0002884078,0.0003367107,0.0001973999,0.0003290244,0.0003751032,0.00039489,0.000862461],"category_scores_gemma":[0.0003061622,0.0002704591,0.0002788449,0.0002257005,0.000290467,0.0002169973,0.0002717203,0.0007263245,0.0004512203],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003995379,"about_ca_system_score_gemma":0.0002112626,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001297029,"about_ca_topic_score_gemma":0.001095496,"domain_scores_codex":[0.9997706,0.00005105354,0.00002583657,0.000042165,0.00006798928,0.00004244783],"domain_scores_gemma":[0.9997726,0.0000790205,0.00005677018,0.00004359405,0.00001801489,0.00003002093],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008983231,0.00002227243,0.00009457242,0.00001857323,0.000003092567,0.00004480529,0.00002740288,0.0001238905,0.998446,0.0002205394,0.00001572218,0.000893236],"study_design_scores_gemma":[0.000008775898,0.0001024165,0.001722328,0.000003874226,0.000008208215,0.0001157783,0.00003088079,0.0005752963,0.9964224,0.00005306407,0.0009519082,0.000005093924],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.9945775,0.0004011607,0.003712757,0.00006245918,0.00002681299,0.00001567718,0.0001492829,0.00009288072,0.0009614256],"genre_scores_gemma":[0.9895918,0.0002863574,0.002666838,0.0000316123,0.000009287141,0.000017316,0.0004647571,0.00008145952,0.006850557],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.001297029,"threshold_uncertainty_score":0.002898932,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02554462151521158,"score_gpt":0.4075679944719368,"score_spread":0.3820233729567252,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}